ggKbase home page

scnpilot_solids1_trim150_scaffold_2945_4

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 1163..1552

Top 3 Functional Annotations

Value Algorithm Source
GH3 auxin-responsive promoter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCG0_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 104.0
  • Bit_score: 128
  • Evalue 5.20e-27
GH3 auxin-responsive promoter similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 104.0
  • Bit_score: 128
  • Evalue 1.60e-27
GH3 auxin-responsive promoter {ECO:0000313|EMBL:ACU59543.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 104.0
  • Bit_score: 128
  • Evalue 7.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 390
ATGAAAATCAAATCACTCTTTGCAAAACCATTTGCGATTTACGTAAACAAGCTGGTGAGGAAATCTATGGGTACTGCTTTGGCAGATCAAAATTCAATTTTTGATTCCGTCATCAAATCAGCTCAGAATACCGAATTCGGAAAGGAACATCACTTTTCGGAAATAAAAAACTTTAAGGATTATCAAAGCCGGGTGCCGGTGAGAGATTATGAAGCCTTCAAACCTTACATTGATAAAATTATGCAGGGGAAGCAAAATATTCTCTGGAGGGGCCAACCGATTTATTTTGCAAAGACNNCCGACAGGACGGCTGAGTGGAATTGTCAACCATCATGTGCCCTATTATTTGCGGAGCAACCAGTTGCCATCTTTTACCACCAATTGTATTGA
PROTEIN sequence
Length: 130
MKIKSLFAKPFAIYVNKLVRKSMGTALADQNSIFDSVIKSAQNTEFGKEHHFSEIKNFKDYQSRVPVRDYEAFKPYIDKIMQGKQNILWRGQPIYFAKXXDRTAEWNCQPSCALLFAEQPVAIFYHQLY*