ggKbase home page

scnpilot_solids1_trim150_scaffold_3988_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 511..960

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMR4_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 155.0
  • Bit_score: 183
  • Evalue 2.10e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 155.0
  • Bit_score: 183
  • Evalue 6.50e-44
Uncharacterized protein {ECO:0000313|EMBL:AEI51297.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 155.0
  • Bit_score: 183
  • Evalue 2.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAAACAGCAACTCAATGGCTTTCTGAATATGGCGAAAGCCATCAAAACCCAACCAACAAACGGGTTCACTGGATTTGTGTACCTCTGATTTTTCTCTCGGTAACAGGTTTTTTGTATAGTATCAAAATCCCTGTGGTACATAACATGGCAGTAATTGTTCTCATTCTTGCCATGATTTACTATTTCAGGCTTTCCCTTTCACTCGGGATTGGGATGTTGGTATTTTCGTGCATTTGCCTGGGAATTTGTTTTTGGGTTCAAAGGCATGTTCCCTACCCACTGTGGCTTCTCTCTCTGATTGTATTTGTACTTGCCTGGATTGGCCAGTTTTACGGGCACTGGGTTGAGGGCAAGAAACCTTCTTTCTTCAAAGACCTTCAATTTCTGTTGATTGGCCCGATGTGGATAATGAGTTTTATCTACAAAAAAGTCAATATCAGTTTTTGA
PROTEIN sequence
Length: 150
MKTATQWLSEYGESHQNPTNKRVHWICVPLIFLSVTGFLYSIKIPVVHNMAVIVLILAMIYYFRLSLSLGIGMLVFSCICLGICFWVQRHVPYPLWLLSLIVFVLAWIGQFYGHWVEGKKPSFFKDLQFLLIGPMWIMSFIYKKVNISF*