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scnpilot_solids1_trim150_scaffold_2035

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2035_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..565
DNA (564bp) protein (188aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WMQ3_9GAMM rbh
Putative outer membrane protein {ECO:0000313|EMBL:EIM00745.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative outer membrane protein
scnpilot_solids1_trim150_scaffold_2035_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(669..2108)
DNA (1440bp) protein (480aa)
Ribonuclease II n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL3_9GAMM
exoribonuclease R
Exoribonuclease R {ECO:0000313|EMBL:AGG90297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2035_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2224..2697
DNA (474bp) protein (158aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL2_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90298.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2035_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2765..3661)
DNA (897bp) protein (299aa)
SapC protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L5_9GAMM
SapC protein {ECO:0000313|EMBL:EIL95456.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SapC
scnpilot_solids1_trim150_scaffold_2035_5
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3704..4309
DNA (606bp) protein (202aa)
Restriction endonuclease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L6_9GAMM
restriction endonuclease
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_2035_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4484..4954)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95458.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2035_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5095..6984
DNA (1890bp) protein (630aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM1_9GAMM
scnpilot_solids1_trim150_scaffold_2035_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7284..7784
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYB4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92205.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_2035_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7879..8154
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2035_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8348..9175)
DNA (828bp) protein (276aa)
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
Release factor glutamine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK7_9GAMM
scnpilot_solids1_trim150_scaffold_2035_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9168..13265)
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90305.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2035_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13854..15662)
DNA (1809bp) protein (603aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=M4NBD7_9GAMM
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AGG87909.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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