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scnpilot_solids1_trim150_scaffold_372_17

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 15694..17595

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FKD8_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 569.0
  • Bit_score: 648
  • Evalue 5.60e-183
  • rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ENZ93834.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 569.0
  • Bit_score: 648
  • Evalue 7.90e-183
putative NTPase VagA; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 569.0
  • Bit_score: 521
  • Evalue 4.30e-145

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Taxonomy

Xanthomonas fragariae → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1902
ATGGGTGTCTTGCGAACCAGGGTTGCGGGAGTCGTCGCGCTGCTGCTGTTGGCGCTGACCGTTGGACTCTATCTCGGCGGCCTGCTCACGCTGTGGCTGCTCCGGCAGCCGGCGCCGCTGCATTTCACCACCTATGTCGAATACTGGCAGGCACTCGGCCAGCCGGACTGGCAACCGTTTGCCGGCAAGATCCGGTTGGCCGGTGGTCTCGGTTTCGGTTTGCCGTTGCTGTCGTGGGCGATCGTTGCGGTGTTGATCCTCAAGCCCCGCGCCAGGGCCTTCCATGGCGATGCGCGCTTTGCCGGTCGCGGCGACCTGGCTCGCGCCGGCCTGCTCAAGCCGTCGCCCGAAGGCGTCATCATCGGCAAGGCAGGCGGTGATTACCTTTATCTCGGCGGCACGCGGCACATCGTCATGACGGCGCCGACGCGCACCGGCAAGACCACCTCCATCGCGATTCCGGTGCTGCTGACTTACCGGCATTCCATCGTCTGCATGGATCTCAAGGGCGAGTTGTTCCAGCACACCAGCGGATACCGCGCCGGCATCGGGCAAACCATCTATCGCTTCGCGCCGTATGCCGAGGACGGCCGTACACATCGCTTCAATCCGCTGATGGCGATGTCCTCCGATCCGCGCGTGCGCGTGGGCGAACTGCAGACGCTCGGCGCGATCCTGTATCCGGATGAGCCTGGTCAGGACCCGTTCTGGACGTCGCAATCGCGCACTGCCTTCGTGGCATTTGGCTCGTACCTGTTCGAGGCATGGGACGACAAGGTTCGCCAGAATCTTCACGGTTCCGACGGCCGTCCCATCGACCCCAACACGCACGACGCCTTCCCCAGCTTCGAGCGTATCTATCGCTTTTCCGCCGGCGATGACGGCGAGCTAAAGGCGTTCCTGCAGGCGCGGCTCAAGGAACCGTTCGTCAGCACGGCCACCCGAGCCGCCCTCACCAGCCTGACCGGCATGGCCGAACAGACCTTCGCCTCGGTGATCGCCACCACCCAGGCGCCGCTGCAACAGTTCCTCAGCCCGATCCTGGCCGCAGCCACCAATGCCTGCGATTTCGACGTGGACGTCCTGCGTCGACGCCCCGTTACCATCTATGTGGTGATTCCGCCGCAGAAGCTGGGCGAGGCGCGCCGGCTGCTCAACATCTTTTTCTCCACCGTGATCGGACAGAACCTGCGGCAAACCCCGCAGGATGATCCCGCGCTCAAATACCAGATGCTGCTGCTGATGGACGAGTTCACCGCGATGGGGCGGGTCAATGTGTTGTCCGAGCGGATCTCGCTCACCGCCGGTTACGGCATTCGTGACCTGTCGATTATCCAGAGCCTGTCGCAGCTGGACGCGACCTACGGTGCGGACGAGGCACGCACCTACATCACCAACCACGCCGCCAGCATCGTGTTCACTCCGCGCGAGCAGCGCGATGCCGAGGAGTACTCCAAGATGCTTGGTGACACCACGGTCAAGCGACGCACCCGCAGCACCGGCAAGCAAGGCACCAGCTACAGCCACACGGAAGAGCGACGCCCACTGATGCTGCCGCAGGAGTTGAAGGAGCTGCCAAACGACGAGGAGATCATCTTTCTCGAGGGTTGTCGCCCCATCAAGTGCCGCAAGAACTGGTACTTCAAGGATCGACGACTGAAGCAACGTATCGTTCCGCCCGTGGCCGTGCGGCCGATCTCCGCGGCTGGAGAACATCCCATGCCCGGCAAGACCCGGCAGGCCATTGCGGCTGCCGTCAGCTTGGCGTTGGCGGCGTGCGCTTCGCCATCCATTTCCAACGCCGCCGCTGCGGAAAGCAGCGCGGCGGTTCATGCCGCCCCCGCCATCGGCGTCAAGGCGCAGCACGTGCCAAGTACCCTTTCGAACGGCTGCCGACCTTGA
PROTEIN sequence
Length: 634
MGVLRTRVAGVVALLLLALTVGLYLGGLLTLWLLRQPAPLHFTTYVEYWQALGQPDWQPFAGKIRLAGGLGFGLPLLSWAIVAVLILKPRARAFHGDARFAGRGDLARAGLLKPSPEGVIIGKAGGDYLYLGGTRHIVMTAPTRTGKTTSIAIPVLLTYRHSIVCMDLKGELFQHTSGYRAGIGQTIYRFAPYAEDGRTHRFNPLMAMSSDPRVRVGELQTLGAILYPDEPGQDPFWTSQSRTAFVAFGSYLFEAWDDKVRQNLHGSDGRPIDPNTHDAFPSFERIYRFSAGDDGELKAFLQARLKEPFVSTATRAALTSLTGMAEQTFASVIATTQAPLQQFLSPILAAATNACDFDVDVLRRRPVTIYVVIPPQKLGEARRLLNIFFSTVIGQNLRQTPQDDPALKYQMLLLMDEFTAMGRVNVLSERISLTAGYGIRDLSIIQSLSQLDATYGADEARTYITNHAASIVFTPREQRDAEEYSKMLGDTTVKRRTRSTGKQGTSYSHTEERRPLMLPQELKELPNDEEIIFLEGCRPIKCRKNWYFKDRRLKQRIVPPVAVRPISAAGEHPMPGKTRQAIAAAVSLALAACASPSISNAAAAESSAAVHAAPAIGVKAQHVPSTLSNGCRP*