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scnpilot_solids1_trim150_scaffold_1977_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(4781..5566)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54-dependent transcriptional activator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 236.0
  • Bit_score: 383
  • Evalue 2.40e-103
Sigma 54-dependent transcriptional activator {ECO:0000313|EMBL:EIL92421.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 236.0
  • Bit_score: 383
  • Evalue 3.30e-103
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 231.0
  • Bit_score: 381
  • Evalue 1.70e-103

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGCCGATCATGATCGGCCAATCCCAGGCAATCCTCGCGGTGCGGGCGCAGTTGCAGCGCTTCGCCGCCTGCGACGTGCAGGTGCTGATCGAGGGCGAAACCGGCACCGGCAAGGAAGTCGCGGCACGCGAAATCCATTACGCCAGCGCACGCCGGGATTTCCCCTTCGTGCCGGTCAATTGCGGCGCCATCCCCGACAGCCTGATCGAGAGCGAACTGTTCGGCCACGGCCGCGGCGCCTTCACCGATGCCAAGGTGGCGCAGCCCGGCCTGGTCGACCACGCGCGCGGCGGCACCCTGTTCCTGGACGAGGTCGATGCGCTCTCGCCCAAGGGCCAGGTGACCTTGCTGCGCTTCCTGCAGGACAGCGAATACCGCCCGGTCGGCGGCGGCGTCACGCGCACCTCCGATGCGCGCATCATCGCCGCCACCAACAGCTGCCTGGCGCGACAGGTGGAAGCTGGCCGCTTCCGGCAGGATCTGCAATACCGGCTCAACGCGCTGTACCTGCACCTGCCGCCGCTGCGCGAGCGCGAAGGCGACGTTGCCCTGCTGGCACAGCACTTCCTGCATGCGGTGGCGATCCGCCTGCACGGCCCGTTCAAGCACTGGAGCGAACCGGCGCTGGCGGCACTGCAGGCGCACGCGTGGCCGGGCAACGTGCGCGAGCTGGACAACGTCGCGCTCCGCAGCCGCGGCGGCGGGCGAACGAACCGGAGCTCGGCTTCCGCGTGGCCAAGACCCGTGCGATCCACCAGTTCGAGCACGACTACCTGGTGCAGCTGA
PROTEIN sequence
Length: 262
MPIMIGQSQAILAVRAQLQRFAACDVQVLIEGETGTGKEVAAREIHYASARRDFPFVPVNCGAIPDSLIESELFGHGRGAFTDAKVAQPGLVDHARGGTLFLDEVDALSPKGQVTLLRFLQDSEYRPVGGGVTRTSDARIIAATNSCLARQVEAGRFRQDLQYRLNALYLHLPPLREREGDVALLAQHFLHAVAIRLHGPFKHWSEPALAALQAHAWPGNVRELDNVALRSRGGGRTNRSSASAWPRPVRSTSSSTTTWCS*