ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_2236_10

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(8988..9725)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NT35_CHRVO similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 240.0
  • Bit_score: 341
  • Evalue 7.50e-91
hypothetical protein; K06876 deoxyribodipyrimidine photolyase-related protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 240.0
  • Bit_score: 341
  • Evalue 2.30e-91
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KIA81921.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 240.0
  • Bit_score: 341
  • Evalue 8.00e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chromobacterium piscinae → Chromobacterium → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGACCATGCTGCGCCTGCTGCTGGGAGACCAGCTCAACCCCGAACATTCCTGGTTCGCGGCCAGCGATCCCGACGTGCTCTACGTGCTTATGGAAGTCCGCCAGGAAACGGATTACGTCCTCCACCACGCGCAGAAGATCCTGGCGATCTTCGCCGCCATGCGCGACTTCGCCCGTGGGCTGGAGGCAGCTGGTCATCGCGTGCGCTATCTCGCGATCGACGACGCGGCCAACCGTCAGTCGATTCAGGCCAACCTCGACCAGTTGATCGGGGAGTACCGCGCGAGCACCTTCGAGTATCAGGCGCCGGACGAGTGGCGCCTGGATCGCCAGCTGGCAGAGTACGCGCAGCAGCTGCGCATTCCCGCCCGGCAGGTGGACAGCGAACACTTCCTGACCCGGCGCGACGAGGTGGCGACGTTCTTTGCCGGCCGGCGGCGCTGGAAGATGGAGCTGTTCTACCGGCACATGCGCGCGAAGCACCAGGTGTTGCTGGACAGGCAAGGGCGACCGGTGGGCGGCCAATGGAACTTCGATGCCGACAACCGCAAGCGCTGGCCGGGTACGCCGAGCGAACCGGCCGATGCCCGACCGTCGCACGACCACCGCGCGCTGTGGCGGCGCATCGTGGCGGCGGGCGTGCAAAGCTTCGGCACGCCCGCGGCCGGGACGTTCCGCTGGCCGCTCAACCGGGACGAGACGGGCTCGCCGATTTCGGCGACTACCAGGACGCGATGA
PROTEIN sequence
Length: 246
MTMLRLLLGDQLNPEHSWFAASDPDVLYVLMEVRQETDYVLHHAQKILAIFAAMRDFARGLEAAGHRVRYLAIDDAANRQSIQANLDQLIGEYRASTFEYQAPDEWRLDRQLAEYAQQLRIPARQVDSEHFLTRRDEVATFFAGRRRWKMELFYRHMRAKHQVLLDRQGRPVGGQWNFDADNRKRWPGTPSEPADARPSHDHRALWRRIVAAGVQSFGTPAAGTFRWPLNRDETGSPISATTRTR*