ggKbase home page

scnpilot_solids1_trim150_scaffold_1335_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 3948..6338

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 800.0
  • Bit_score: 1352
  • Evalue 0.0
DNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX04_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 800.0
  • Bit_score: 1352
  • Evalue 0.0
DNA ligase, NAD-dependent similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 808.0
  • Bit_score: 1341
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
ATGGCCGCAACCGCCGTTCCCGCCGACATCCTGGCCCGCGCCGCCGCACTGCGCGCGCAGATCGAGCAGGCCAATTACCGCTACCACGTGCTCGACGACGCGGACATCACCGATGCCGCGTACGACCGCCTGATGCGCGAACTGGAAGCGCTGGAAGCCGCACACCCGGCGCTGGCCTCACCCGATTCGCCGACGCGCAAGGTCGGCGCACGCGCGCACGGCGGCTTTGCCGAGGTGCGCCACGCGATCCCGATGCTGTCGCTCGGCAATGCCTTCGAGCAGGACGGCGAGACCGATCGCGAACGCTTCCACGAGGTGGCCGAGTTCGAGCGGCGCATCGAGCAGACGACAAAACGGACTGAACCAGTTTTCTCGGTCGAACCCAAGCTCGATGGCCTGGCGATCAGCCTGCGCTACGAGCATGGCGTGTTCGTGCAGGGCGCCACCCGCGGCGACGGCGAAACGGGCGAGGACGTCACCGCCAACCTGCGCACGGTGCGGGCGATCCCGTTGAAGCTGCGCGGCAAGGACTGGCCCGAGGTGCTCGAAGTACGCGGCGAGGTGATCATGCTGCGCAAGGATTTCGAGGCGTTCAACGCATACGCCCGCGCCCACGACGAGAAGCCGCTGGCCAATCCGCGCAACGGCGCTGCCGGCTCGCTGCGCCAGCTCGACCCGGCGATCACCGCGAAGCGGCGGCTCAGTTTCTTCGCCTACGCGATCGGCGTGGTCGAGGGCGGCGAGCTGCCGCCGACCCATTCGGCCACGCTGCGGCAGCTGCGCGAGTGGGGGTTCCCGGTGTCGCCGGAAGTGGACATCGCACGTGGCTTCGATGGCCTGATCGCCTATTTCCGGCGCATCGGCGCCAGGCGCGACAGCCTGCCTTACGACATCGACGGCGTGGTCTACAAGCTGGACGATTACGAAGGCCAGCGCGAGATGGGTTTCGTCTCGCGCGCGCCGCGCTGGGCGATCGCGCACAAGTTTCCCGCGCAGGAGCAAACCACCCGCCTGCTCGACATCGAGGTGCAGATCGGCCGCACCGGCGCCGCCACGCCGCGCGCGCGGATGGAGCCGGTACAAGTGGCCGGCGTCACCGTCACCTACGCCACGCTGCACAACGCCGACCAGGTCGCGCGGCTGGATGCGCGCATCGGCGACACGGTGATCGTGCGCCGTGCCGGCGACGTGATTCCGGAAGTGGTGCGCGTGGTCGAGGACCAGCGCCCGCCCGGCACGGTGCCGTGGACGATGCCCGCGCAATGCCCGGTGTGCGGTTCGGCGCTGATCCGCGAAGAGGGCGCCGCCGCCTGGCGCTGCTCCGGCGGACTGATCTGCGCGGCACAGCGCAAGGAGGCACTGATCCACTTCGCGTCGCGTCGTGCCATGGACATCGAAGGCCTGGGTGAGCGCTTCGCCGAGGCGCTGGTGGAGTTCGACATCGTGCACTCGCCAGCCGATCTGTACGCGCTCACCGTCGACAGCTTCGTGGCGATGAAGCAGGCGATCGACGAACGGGACGGCACCACGCCCGAAACGGTCAAGGCCGGCAAAGTGGCGACCAAGTGGGCCGAGAACCTGGTCGCCGGCATCGAGGCCAGCAAGCACACCACGCTGGCGCGCTTCCTGTTCGCGCTGGGCATCATGCATATCGGCGAGAGCACGGCCAAGACGCTGGCCGCGTGGCTGGGCCGGCTCGATGTCGTGCGCGCCATGCCGGCGCCGGTACTGCGCGTGCTGCCTGACGTCGGCGCCGAAGTGGCCACCTCGATCGCCGGCTTCTTCGCGCAGGCGGGCAACCAGCAGGTGGTCGATGCGCTGCTCGAGGCCGGCATCGTGTTCAGTGACGAGCGCGCGCCTTCGCCGCAGCTGCGCGAGCGGCTGAATCTGGGCGTGCTGCTGGACATGGCCGGGATCAACAAGCTCGGTCCCAAGAGCAGCAAGCTGCTGGCGCAGCATTTCCCCACGCTCGATCGCCTGCTCGCCGCGGGCGCGGCGCACTGGATCACCGCTGGCGTGCCGCAGGCCGCGGCGGCGGCGTTGGAAGCCTTCCTGGCCGATCCCGCTGCACAGGCTGCGTTGCGCGATGCCGAGGCAGCGATGCACCGCCTGCTCGATGCGATTCCCGCCGGCGCGGCCGTGGCCACGGCGCCGCTGGACGGGCAGACCTTCGTGCTCACCGGCACGCTGGCCTCGCTCAGCCGCGACGAGGCAAAGGATCGGCTGGAGGCGCTGGGCGCCAAGGTCTCCGGATCGGTCTCGAAAAAGACCAGCGTGGTGGTGGCAGGCGTTGAAGCCGGCTCGAAACTGGACAAGGCGCAGGAGCTTGGCGTGCCGGTCTGGGACGAGGCGCAGTTGCTGGCCTTGCTCGACGAGCACGGGGCGGGTTGA
PROTEIN sequence
Length: 797
MAATAVPADILARAAALRAQIEQANYRYHVLDDADITDAAYDRLMRELEALEAAHPALASPDSPTRKVGARAHGGFAEVRHAIPMLSLGNAFEQDGETDRERFHEVAEFERRIEQTTKRTEPVFSVEPKLDGLAISLRYEHGVFVQGATRGDGETGEDVTANLRTVRAIPLKLRGKDWPEVLEVRGEVIMLRKDFEAFNAYARAHDEKPLANPRNGAAGSLRQLDPAITAKRRLSFFAYAIGVVEGGELPPTHSATLRQLREWGFPVSPEVDIARGFDGLIAYFRRIGARRDSLPYDIDGVVYKLDDYEGQREMGFVSRAPRWAIAHKFPAQEQTTRLLDIEVQIGRTGAATPRARMEPVQVAGVTVTYATLHNADQVARLDARIGDTVIVRRAGDVIPEVVRVVEDQRPPGTVPWTMPAQCPVCGSALIREEGAAAWRCSGGLICAAQRKEALIHFASRRAMDIEGLGERFAEALVEFDIVHSPADLYALTVDSFVAMKQAIDERDGTTPETVKAGKVATKWAENLVAGIEASKHTTLARFLFALGIMHIGESTAKTLAAWLGRLDVVRAMPAPVLRVLPDVGAEVATSIAGFFAQAGNQQVVDALLEAGIVFSDERAPSPQLRERLNLGVLLDMAGINKLGPKSSKLLAQHFPTLDRLLAAGAAHWITAGVPQAAAAALEAFLADPAAQAALRDAEAAMHRLLDAIPAGAAVATAPLDGQTFVLTGTLASLSRDEAKDRLEALGAKVSGSVSKKTSVVVAGVEAGSKLDKAQELGVPVWDEAQLLALLDEHGAG*