ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_2762_11

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 8196..8729

Top 3 Functional Annotations

Value Algorithm Source
Protein GrpE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI84_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 277
  • Evalue 1.30e-71
molecular chaperone GrpE (heat shock protein) similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 177.0
  • Bit_score: 276
  • Evalue 5.10e-72
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 178.0
  • Bit_score: 280
  • Evalue 2.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCACGACAACGACACCCAGGCGCATGACGAGGCCATGGACCCCGGGTCGGCACCAGCCGTCGACGGCGACCAGTTCGCCAAGCTGCAGGCCCGCGTGGCCGAACTGGAGGCGATCAACGCCGAGCTGCAGGAAACGGTCTTGCGCGAGAAGGCGGAGATCGAGAACCAGCGTCGGCGCCTGCATCGGGACCTGGAGCAGGCCCGGCGGTTTGCCAACGAGAAACTGCTGAACGAATTGCTGCCGGTATACGACGGACTGGAGAGCGGCCTGGCAGCCGAGGGCGGCGACGTCGCCTCGATACGCGAGGGCCTCGGTCTCACCCTGAAAGCGCTGCTCAAGGTCGCCGGGAACCACGGCATGGCGCAGGTCGATCCGATCGGCCAGCCGCTCGATCCCGAGCGCCACCATGCGGTGAGCATGGTCGCGGCCCCCGGCCAGGCGCCGGGCACCGTGGTCAGCGTGCTGCAGAAAGGCTACGTGCTGAACGATCGCCTGCTGCGTCCGGCGCTGGTCGCCGTGGCGAAGGACTGA
PROTEIN sequence
Length: 178
MHDNDTQAHDEAMDPGSAPAVDGDQFAKLQARVAELEAINAELQETVLREKAEIENQRRRLHRDLEQARRFANEKLLNELLPVYDGLESGLAAEGGDVASIREGLGLTLKALLKVAGNHGMAQVDPIGQPLDPERHHAVSMVAAPGQAPGTVVSVLQKGYVLNDRLLRPALVAVAKD*