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scnpilot_solids1_trim150_scaffold_2843_10

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(7001..7519)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 172.0
  • Bit_score: 324
  • Evalue 5.10e-86
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 172.0
  • Bit_score: 321
  • Evalue 2.30e-85
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 173.0
  • Bit_score: 327
  • Evalue 8.40e-87

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
CTGGATGCGTTCCTGGCCGACGTGGAGCGCCGCGCGTTCCGCATGGCCGAGCTGCAGTTGCGCCATCGCGAGGACGCCATGGACGCGGTGCAGGACGCCATGCTGCGACTGGTACGGCATTATCGCGACAAGCCGGCCGCGGAATGGGCGCCGCTGTTCTGGGGCATCCTGCGTCGACGCATCGTGGACCTGCAGCGCCGGCGCAAGGTGCGCTCGATCGTGGTCGGCTGGCTCGGCGGCGGGCATGACGACGGCGGCGACGAGCTGCCCGTGTGGGAGCCGGCCGACCCGGGCAAGGACCCGCTGGGCCGGCTGCACGACGCGCAGTCGTACGCGGACATGGCCGCGGCGGTGCAGTGCTTGCCCAGGCGTCAGCGCGAGGCGTTCATCCTGCGCATGCTGGAAGGGCTTGACGTGGCGGAGACCGCACGCGCCATGGGCTGCGGCGAAGGCAGCGTGAAAACCCATCTGTCGCGCGCCATGCATCAGCTGCGCGACCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 173
LDAFLADVERRAFRMAELQLRHREDAMDAVQDAMLRLVRHYRDKPAAEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLGGGHDDGGDELPVWEPADPGKDPLGRLHDAQSYADMAAAVQCLPRRQREAFILRMLEGLDVAETARAMGCGEGSVKTHLSRAMHQLRDQLEDWR*