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scnpilot_solids1_trim150_scaffold_1421_9

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 6544..6930

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ85_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 128.0
  • Bit_score: 238
  • Evalue 3.60e-60
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 128.0
  • Bit_score: 238
  • Evalue 5.00e-60
iojap-like ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 128.0
  • Bit_score: 237
  • Evalue 2.50e-60

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
TTGAGCACAGCTCGTAGCACCCCGGCCGTCACCACGGCCACCCTGCGCAAGTGCGTCATCGACGCGCTCGAAGAACTGAAAGCCAAGGACATCCGCGAGATCGACGTCCGCGGCAAGACCTCCATCGCCGACCTGCTGGTGATCGCCTCCGGCACCTCCGCCCGCCACGTCAAATCCATTGCCGACGAAGTCGGCAAATTCGCCAAGAAGGCCGGCGTGATGCCGCTGGGCGTGGAAGGCGAGACCGAGGGCGAATGGGTACTGGTCGACCTGGGCGACGTGATCGTCCACGTGATGCTGCCCCGCATCCGCGAGTTCTACGGCCTGGAGCGGCTGTGGACGGTGGGTGACCACGGGCACGAAGCCGACGCCGCGCAAGCCGGCTGA
PROTEIN sequence
Length: 129
LSTARSTPAVTTATLRKCVIDALEELKAKDIREIDVRGKTSIADLLVIASGTSARHVKSIADEVGKFAKKAGVMPLGVEGETEGEWVLVDLGDVIVHVMLPRIREFYGLERLWTVGDHGHEADAAQAG*