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scnpilot_solids1_trim150_scaffold_1794_9

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 8788..10008

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 406.0
  • Bit_score: 753
  • Evalue 1.50e-214
RtcB protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 406.0
  • Bit_score: 720
  • Evalue 3.10e-205
  • rbh
RNA-splicing ligase RtcB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 406.0
  • Bit_score: 753
  • Evalue 1.00e-214

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAGCAACCAACAGTACGAGTTTCTGCATGCCGAAGGCAGCGCCACGCCGATCAAGGGCTGGGTGCATGGCGTGCCGCTGGAAGATGCCGCGAGGCAGCAGCTGCGCAACATCGCCACGCTGCCGTTTGTCGGCCCGTGGGTCGCGGTGATGCCCGACGTGCACCTGGGCAAGGGCGCGACGGTCGGTTCAGTCGTGCCCACGCGGGGCGCGATCATCCCGGCTGCGGTCGGCGTGGACATCGGCTGCGGCATGGCCGCGGTGCGCACCACGCTGCGCGCCAGCGACCTGCCGGACAACCTGGCCCAGCTGCGTTCCAGCATCGAGCGCGGCGTGCCGGTCGGCAACGGCCGTGGTGGCGACCATCACAAGCTGCCGGACAGCATTGAGACGCAACTGGCGCAATCCGGGCTGGTCGCGCGGCTGGAAGCAATCAAGGCGAAGCATCGCAAGATCCGCACCGACAAGCTGGACCGGCAGATCGGCACGCTGGGCGGTGGTAACCACTTCATCGAGGTCTGCCTCGACGAATCGGACGCCGTGTGGGTGATGTTGCACTCGGGTTCGCGCGGCACCGGCAACCTGATTGGTAGCTACTTCATCGAGCGGGCGCGCGAGGAGCTGGCGCAGCGCGTGCTGGGTTTCGACCTGCTGGACAGAGACTTGGCCTTCTTCATGGAAGGCGAAGCATTGTTCGACGACTACGTGGAAGCGGTGTCTTGGGCGCAGGACTACGCCCAGGCCAACCGCGAGGCGATGATGGCGCGGGTGTTGGCCGAGATGCGCCACCGGCTGCCGAAGTTCCAGTTGGAAAAGCTGGCGGTGAACTGTCACCACAACTACGTGCAGAAGGAAACGCACGGTGGCGAGGACTTGCTGGTGACCCGCAAGGGTGCGGTGAGCGCGCGGGCCGGCGAGCTGGGCATCATCCCGGGCAGCATGGGTACGTGCAGCTACATCGTGCGTGGCAAGGGCAATCCGGAAAGTTTCCACAGCTGCAGCCACGGCGCGGGCCGGGTGATGAGCCGTACCGCGGCGCGCCAGCGGATCACGCTGGCGCAGCATCGGGAGGCCACCGCCCATGTCGAATGCCGCAAGGACGCGGCGGTGATCGACGAATCGCCGGCGGCGTACAAGTCGATCGACGCGGTTATGGCGGCGCAGTCCGACCTGGTCGACGTGGTGCACACGCTGCGCCAGGTGCTGTGCGTGAAGGGATGA
PROTEIN sequence
Length: 407
MSNQQYEFLHAEGSATPIKGWVHGVPLEDAARQQLRNIATLPFVGPWVAVMPDVHLGKGATVGSVVPTRGAIIPAAVGVDIGCGMAAVRTTLRASDLPDNLAQLRSSIERGVPVGNGRGGDHHKLPDSIETQLAQSGLVARLEAIKAKHRKIRTDKLDRQIGTLGGGNHFIEVCLDESDAVWVMLHSGSRGTGNLIGSYFIERAREELAQRVLGFDLLDRDLAFFMEGEALFDDYVEAVSWAQDYAQANREAMMARVLAEMRHRLPKFQLEKLAVNCHHNYVQKETHGGEDLLVTRKGAVSARAGELGIIPGSMGTCSYIVRGKGNPESFHSCSHGAGRVMSRTAARQRITLAQHREATAHVECRKDAAVIDESPAAYKSIDAVMAAQSDLVDVVHTLRQVLCVKG*