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scnpilot_solids1_trim150_scaffold_1794_13

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 12827..14710

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Rhodanobacter denitrificans RepID=M4NC76_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 627.0
  • Bit_score: 1018
  • Evalue 2.70e-294
protein-export membrane protein, SecD/SecF family similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 627.0
  • Bit_score: 1018
  • Evalue 8.40e-295
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 627.0
  • Bit_score: 1018
  • Evalue 3.80e-294

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGACTGATTTTCCCCGCTGGAAATACGCGCTGGTCGCGCTGGTGATGGTGTTCGGCGTGATCTACGCGCTGCCGAACGCCTTTGTTCCCGTGCCCGCCGTTCAGGTGAGCGCCAATCGCGGTGCGCCGGCAATCGACCAGGCCGTACGCCAGAAGGTCATCGACACGCTGACCCAGAAGCGCATCGCCTTCGGCGAGGTCGTGGTGGAAGGCGACAGCCTGCTTGCCACCTTCGCCGACACCGACGTGCAGAAGAGCGGCTCGGACGCGATCAAGGCGCTGCTCGGCGACAAGTACACGGTGGCGTTCAAGCTGCAGTCCACCGTGCCGGAGTGGCTGGGCATGATCGGTGCCCGTTCCATGCCGCTGGGCCTGGACCTGCAGGGCGGCGTGCACTTCCTGATGCAGGTCGACCAGAACGACGTCATCGACAAGCAGGAGAGCAGCTACGCCGACGACATCCGCAGCCTGCTGCGCGACAAGAAGATCCGCTATGAATCGGTGGCGCGCAATTCCGTGCGCGGCAAGGGCGTCGCCGTGGTGCTGCGCTCGGAGGACGACCGCGCCAAGGCCGCAGACGCGATCGCCAACGAGTACACCGACTTGCTGGTGTCCAACGGTCCCAGCACCGGCGACCGTTTCGTGCTCAATGCGGTGATCAAGCCCGACAAGCTGCGCGACATCGGCCGCGGCGCGATCACCCAGAACCTGCAGACGCTGCGCAACCGCATCAACGCGCTGGGCGTGTCCGAGCCGCTGATCCAGCAGCAGGGCGAGAACCACATCGTGGTCGACCTCGCCGGCGTGCAGGACCCGGCCGAGGCGAAGAAGCTGATCGGCACCGTGGCCACCCTGGAATACCGCCCCGGCATCGGCCACCCCGGCGATCCGCAGGCGCGCGAGGCGGAGAAGACCGGCAACATCCCGCCGGACGCCAACCTCTACCACATGCGCGGCACCGGCCTGCCGGTGCTGGTCAGCAAGAAGGTGATCGTGACCGGCAAGGAGCTGGTCGACGCCTCCTCGGGCATCGACCAGCAGAGCGGCACGCCCAAGGTCGACGTCACGCTCAATGCCGCCGGCGCGCGCAAGATGAGCGATTTCACCAACGCGAACGTCGGCAAGCCGATGGCGGTGGTCTACGTCGAGCGCGTGACCGAGACCAAGATGATCGACGGCAAGGAAGTGCGCGTTCCGAAGGTCACCGAGTCGGTGATCAACGACGCCAACATCGCCAGCCCGTTCGGCCGGCAATTCCAGACCACCGGCCTGGGCAGCCCGAAGGAAGCATCCGACCTGGCGCTGCTGCTCAAGGGTGGCGCGTTCGCTGCTCCGGTGGACATCATCGAGGAAGGCGTGATCGGTTCCAGCATGGGTGCGGACAACATCGACAAGGGCTTCAAGTCGGTGATGCTGGGCCTGGCCCTGGTGCTGCTGGCCGCCGCGGTCTACTACAAGCTGTTCGGCCTGGTCGCGGACATCGCGCTGTTCTTCAACCTGGTGATCCTGGTGGCGGTGATGTCGCTGATCGGGGTGACCCTGACCATGCCCGGCATCGCCGGCATCGTGCTCACCCTGGGCATGGCGATCGACGCCAACGTGCTGATCTGCGAACGCGTGCGCGAGGAGCTGCGCAACGGCTCCACGCCGCACGCGGCGATCTACGCCGGCTACGAGAAGGCCTGGTCGACCATTCTGGACGCCAACGTCACCCACCTGATCGCGGCGCTGGCGCTGACCACGATGGGCACCGGCGCGATCAAGGGCTTCGGCGTCACGCTGATGATCGGCATCCTGACCTCGCTGTTCACCTCGGTGACGCTGACCCATGCGTTCACTGCGGCGATCCACGGCCACCGCAAGCTCAAGACCCTGTCGGTCTAG
PROTEIN sequence
Length: 628
MTDFPRWKYALVALVMVFGVIYALPNAFVPVPAVQVSANRGAPAIDQAVRQKVIDTLTQKRIAFGEVVVEGDSLLATFADTDVQKSGSDAIKALLGDKYTVAFKLQSTVPEWLGMIGARSMPLGLDLQGGVHFLMQVDQNDVIDKQESSYADDIRSLLRDKKIRYESVARNSVRGKGVAVVLRSEDDRAKAADAIANEYTDLLVSNGPSTGDRFVLNAVIKPDKLRDIGRGAITQNLQTLRNRINALGVSEPLIQQQGENHIVVDLAGVQDPAEAKKLIGTVATLEYRPGIGHPGDPQAREAEKTGNIPPDANLYHMRGTGLPVLVSKKVIVTGKELVDASSGIDQQSGTPKVDVTLNAAGARKMSDFTNANVGKPMAVVYVERVTETKMIDGKEVRVPKVTESVINDANIASPFGRQFQTTGLGSPKEASDLALLLKGGAFAAPVDIIEEGVIGSSMGADNIDKGFKSVMLGLALVLLAAAVYYKLFGLVADIALFFNLVILVAVMSLIGVTLTMPGIAGIVLTLGMAIDANVLICERVREELRNGSTPHAAIYAGYEKAWSTILDANVTHLIAALALTTMGTGAIKGFGVTLMIGILTSLFTSVTLTHAFTAAIHGHRKLKTLSV*