ggKbase home page

scnpilot_solids1_trim150_scaffold_1072_22

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 16982..18730

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane signal peptide protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSW3_DESBD similarity UNIREF
DB: UNIREF100
  • Identity: 25.5
  • Coverage: 553.0
  • Bit_score: 108
  • Evalue 3.30e-20
transmembrane signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 25.5
  • Coverage: 553.0
  • Bit_score: 108
  • Evalue 1.00e-20
Tax=BJP_08E140C01_Desulfomicrobium_58_14 similarity UNIPROT
DB: UniProtKB
  • Identity: 26.9
  • Coverage: 587.0
  • Bit_score: 112
  • Evalue 2.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Desulfomicrobium_58_14 → Desulfomicrobium → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGAGGCTTGCCGGCGGTCTCGTGCGGCATCGGATCTCGCGCATGTTGTGCCTCGTTGCCGTGACGCTTGCCGCCGGCAGTGCGATGGCGCAGGACGCCGGTCAGTCCGGTGTCGAACCCACCACGATGACGCGCGATACGTCGATCTGGGTCAACCACGACTACTCGATCGAGGTCAGCGAGACTACGGAGGTCAACGCGGCGACCCCGTGGGAGTTCCATCGCGACCTGGTTCTTCCGGGCCGCAAGCTCGCACTTCGCGACGTGTTCCTGATGGGGGCTGCCGAGAACGGCGACGGGGTGACGACCGAGGTTGCGCCGCTGGGCGATGGCGTGCGTATCACCGTGCATCCGACACGTCGCGTGGGGATGCAGTTGTTCGAACTCGATTACCGCGTCCTGTACAAGGCGGTCGACGATGGCAAGCTCGTTTGGCCGCTCACCTCGGCCACCGATCGACTGTCGCTGCAGCGTGCGAAATTGGTGGTGAAGCTGCCGCAGGAAACGCCTTCCAGTCAGATCCATGCGCAGTTCCAGCTCGACGGTGCGCCTGTCACGGCAGGGGATCGCCGAGTCACCGGAACCAAGGTCGACCTGGGTTGGCACGATGCCGTCGCGCCGGGGCAGGTGTTGGGCGCGGTGCTCACGTTTCCCGAGGTGGCCGAGGCATCGACCCCCCTTTTGTCGGCTGGGCCGGCCTGGATGTTCAACGGCACCGTGTGGCTGGCCGTGCTGGCGTTGTACTACCTCCTGGCGAAAATTTTCTTCACCGGCGGCGGCGACGGCAAACCCGTGATCGTGGAGTACGAGCCGCCGACCGGCTGGTCCGCCGGCGCCGTGCGGTTGCTGTGGCACGGTGCCTGGGATGAAAAATGCTTTGCCACCGGCGTGCTCGGCATCGCCGCCAAGGGTGGGCTCACGCTGGCCCGGCAGGACGATGGCACATGGGTGGCAACGCGAACCGGCGGTGACCTTGCCCCGGCCTTGACGATGGACGAACACCGGTTGCGTTCGGCGTTGTTCGCGTTTGGCCCCACGGCGGAGTTCTCCGAGGCCCATGCCGACAGCACCGGCCTTGCCGAGCTTGCTTTCCGGCGTGCGCTGGAGAATCGCTGCGCGGGCGAACGTCCAGGCGATCCCGCCTGGCTGTTGATCCCCGGCTGGCTGACCGCGCTGACCGGCGCCACGCTGTTGTTCTTCGGCATCGACAGTCGTTTCGTGATCCTGGGCGAGATTGCGGCTCCCAGCCTCGTCGGTGCGCTCGTCGTGGCGATGCTGATGGACGTGGTCCCGCTTGCGATCCTGCGCGCCACTCGCGCGCAGGTGTACGTCGTGGCCGCGATCGCCGCGATCGGCCTGCTGGGCGGCGGCGATCGGCTGGACTGGCTGACGGGCGCCGCGCTGCTCGCCGGCCAGGTCGCCGCGGGCTGGTGGTTGCTGCGCCAACCGCCGCGGGAGACGCCGTTGCGGCGCAAGCTGCACGGCTTCCGCTGGTACCTCGGCACCGCCGAACAGCCGGACATGGATGCGCGCTACAAGCCGTCGCTCCATCCCGAACTCCAGGCGAGCCTGCTGCCGTACGCGATGGCGCTGGATGTGGCGGTGACGTGGAACGCCCGCTTCGCGCATTCGCTCGAAGAGGCGGGAGGGCAAGAGGATTTCATTGCCAGCCTGAATCCCGACCATGACGACGCCGCGCTGGAACTGCTGGCTTTTGCACAGGCGATGGCGCGTCGCATCCCGAAATGA
PROTEIN sequence
Length: 583
MRLAGGLVRHRISRMLCLVAVTLAAGSAMAQDAGQSGVEPTTMTRDTSIWVNHDYSIEVSETTEVNAATPWEFHRDLVLPGRKLALRDVFLMGAAENGDGVTTEVAPLGDGVRITVHPTRRVGMQLFELDYRVLYKAVDDGKLVWPLTSATDRLSLQRAKLVVKLPQETPSSQIHAQFQLDGAPVTAGDRRVTGTKVDLGWHDAVAPGQVLGAVLTFPEVAEASTPLLSAGPAWMFNGTVWLAVLALYYLLAKIFFTGGGDGKPVIVEYEPPTGWSAGAVRLLWHGAWDEKCFATGVLGIAAKGGLTLARQDDGTWVATRTGGDLAPALTMDEHRLRSALFAFGPTAEFSEAHADSTGLAELAFRRALENRCAGERPGDPAWLLIPGWLTALTGATLLFFGIDSRFVILGEIAAPSLVGALVVAMLMDVVPLAILRATRAQVYVVAAIAAIGLLGGGDRLDWLTGAALLAGQVAAGWWLLRQPPRETPLRRKLHGFRWYLGTAEQPDMDARYKPSLHPELQASLLPYAMALDVAVTWNARFAHSLEEAGGQEDFIASLNPDHDDAALELLAFAQAMARRIPK*