ggKbase home page

scnpilot_solids1_trim150_scaffold_2250_11

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(9626..10858)

Top 3 Functional Annotations

Value Algorithm Source
Pheromone shutdown-related protein TraB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIM0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 411.0
  • Bit_score: 697
  • Evalue 6.90e-198
pheromone shutdown-related protein TraB similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 412.0
  • Bit_score: 696
  • Evalue 4.80e-198
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 412.0
  • Bit_score: 702
  • Evalue 3.90e-199

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGAGTGTTCCCGAAACCGCAGTCGCCCCGCCGGCAGCCCTCGAAGGACAGCCGCTGGAGCGCGTGCAGCGCGATGGCGTCGAGTACGTGGTGCTGGGCACCGCCCACGTCTCGCGCAGCAGCAAGGAAGCAGTCGAGGCGCTGCTGGCCAGCGAGCATTTCGACGCGGTGGCGGTGGAGCTGTGCGAAAGCCGCGCGCAGGGCATGCGCGATCCGGAAGCGTTCAAGCAGATGGACCTGTTCCAGGTGATCCGCCAAGGCAAGGCCGGCATGGTCGTCGCCAGCCTGGTGCTGTCTACCTTCCAGAAGCGCCTTGCCGAGCAGTCGGGCATCCAGCCCGGCGCCGAGATGAAGGCAGCGATGGACGGCGCCGAGGCGCACGACGTGCCGCTGTGGCTGATCGACCGCGAAGTCGGCACCACGCTGAAACGCGCCTGGCGCAGCGTGGGTTTCTGGCAACGATTCGGCCTGCTCGGCGGGCTCGCCGCCAGCATCTTCGAGCGCAACGACATCGCCGAAGACGAAGTGGAAAAGCTCAAGCAGAGCGACCTGCTGGAAAGCGCCTTCAGCGAGTTCGCCAACGGCTCGAAGCCGCTGTATGAAAGCCTGATCGGCGAACGCGATGCCTACATGGCGGCGCGACTGCGCGAGGAAGCCGCGCACACGCCGTCGGACGAGCCCCGGCGCGTGCTGGTGGTGATCGGCGCCGGCCATCTCAAGGGCCTGTGCACGCTGCTGCGCGAGCAGCACGAAGACCCGGCGCGTACCGTTGCCGAACTGGCGCAGACCCCGCCCAAGGCACGCTGGCCGAAATGGGTTGCCGCCGGCCTGGTGCTGCTGGTGTTCGCCGCCATCGCCTGGGCATTCCACCGCAATGCGGCGCTGGGCACGCAGGCGCTGATGGCGTGGATACTGTTCACCGGCGGCTTCGCTGCCCTGGGCGCGGTGGCGGCCGGCAGTCATCCATTGAGCGTCGCCGCCGCTTTCGTCGCCGCCCCGATCAAGCCGTTCCGCCCCGGCATCCCCGCCGGCGGCATCAGCGCGATGGCCGAAGCCTGGGTGCGTCGTCCACGCGTGGCGGATTTCGACAGCCTGCGCGAAGACATCGTGCACTGGACCGGCTGGTGGAAAAACCGCGTGGCGCGCACCCTGCTCAACTTCATCCTGGTCAGCGTGGGCACGCTTATCGGCGAGTACAGTGCCGGCTTCCACATCGTCAAGAGCCTGTTCTGA
PROTEIN sequence
Length: 411
MSVPETAVAPPAALEGQPLERVQRDGVEYVVLGTAHVSRSSKEAVEALLASEHFDAVAVELCESRAQGMRDPEAFKQMDLFQVIRQGKAGMVVASLVLSTFQKRLAEQSGIQPGAEMKAAMDGAEAHDVPLWLIDREVGTTLKRAWRSVGFWQRFGLLGGLAASIFERNDIAEDEVEKLKQSDLLESAFSEFANGSKPLYESLIGERDAYMAARLREEAAHTPSDEPRRVLVVIGAGHLKGLCTLLREQHEDPARTVAELAQTPPKARWPKWVAAGLVLLVFAAIAWAFHRNAALGTQALMAWILFTGGFAALGAVAAGSHPLSVAAAFVAAPIKPFRPGIPAGGISAMAEAWVRRPRVADFDSLREDIVHWTGWWKNRVARTLLNFILVSVGTLIGEYSAGFHIVKSLF*