ggKbase home page

scnpilot_solids1_trim150_scaffold_2051_9

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(7264..8052)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Rhodanobacter denitrificans RepID=I4WXN2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 262.0
  • Bit_score: 383
  • Evalue 1.80e-103
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 262.0
  • Bit_score: 383
  • Evalue 5.80e-104
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:AGG88903.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 262.0
  • Bit_score: 383
  • Evalue 2.60e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCGCTTTGACCGGGTGGTGATTCCCTGCTTGTTGTTCGCCCTGGCCGGCTGCGTCACCACGCATACCAACACCGGTGCGCTGGGCAAGCCGCTGCCGCAGGAGAGCAAGGCCGAGCAGGCCACGGACGCGGCGCGCATCCACACCGAACTGGGCCAGCATTACCTTGCCACCGGCGACCTGCAGACGGCGCTGAGCAAGGTGCAGATGGCGCTCCAGTTCGACCCGAACTACGCTCCCGCCCATACCGTCCTCGCCTACATCGACGCGCGGATCGGCAAGCTGGCCGAAGCGGAGCAGCACTACCGCAAGGCGGTGGCGCTGGAGCCGACCAAGGGTGCCTGGAACAACAACCTCGGCCAGTTCCTGTGTTCGCGGGGCAACTATGCCGAGGGCGAAACCTATTTTCGCAAGGCAGTGGCCGATCCGTTCTACGCCACCCCTTCGGAGGCCCTGGCCAACGCCGGCGTCTGCCAGCTGATGGCAGGCGACAAAACCAAGGCAGAAGCGGATTTTCGTGACGCCATCGCGCGAAATCCGCAGAATGGCGAGGCACTCTTCCAGCTCGCAAACCTTCTTTACCAGGGGAAAGATGCGTTTCGCGCAAGGGCATTCCTGCAGCGTTTCGACGCGCTGGGCAAACCGACTGCCGCCGCGCTGAAACTGGGGTACGACATCGAATCAAGCATGGGCAACCCGGAGGGGGCCCGCAATTATCTCAAGCGACTGCGCAGCCAGTTCCCGGACTCGGAACAGGCGCACGCCCTTGACTCCATCGACAACCCATGA
PROTEIN sequence
Length: 263
MRFDRVVIPCLLFALAGCVTTHTNTGALGKPLPQESKAEQATDAARIHTELGQHYLATGDLQTALSKVQMALQFDPNYAPAHTVLAYIDARIGKLAEAEQHYRKAVALEPTKGAWNNNLGQFLCSRGNYAEGETYFRKAVADPFYATPSEALANAGVCQLMAGDKTKAEADFRDAIARNPQNGEALFQLANLLYQGKDAFRARAFLQRFDALGKPTAAALKLGYDIESSMGNPEGARNYLKRLRSQFPDSEQAHALDSIDNP*