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scnpilot_solids1_trim150_scaffold_3643_8

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(5955..6176)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 65.0
  • Bit_score: 124
  • Evalue 4.30e-26
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 65.0
  • Bit_score: 124
  • Evalue 1.80e-26
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 65.0
  • Bit_score: 124
  • Evalue 6.00e-26

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
GTGAATGGCGCGACCAGCTGGTGGAAGAGTCGCGCCAGCTATCGCAAGCTGATCTCCAAGATCGACAAGGCGCTGCGCCGGATCGAGGAAGGCAGCTACGGCTTCTGCGAGGAGACCGACGAGGAGATCGGCGTCGACCGCCTCGACGCGCGCCCGATCGCCACGCTCTCGCTCGACGCCCAGGAACGCCGCGAACATCTGCAGAAGCAGATGGGGGACTGA
PROTEIN sequence
Length: 74
VNGATSWWKSRASYRKLISKIDKALRRIEEGSYGFCEETDEEIGVDRLDARPIATLSLDAQERREHLQKQMGD*