ggKbase home page

scnpilot_solids1_trim150_scaffold_3643_11

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(8448..9302)

Top 3 Functional Annotations

Value Algorithm Source
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 282.0
  • Bit_score: 444
  • Evalue 9.50e-122
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIL94830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 282.0
  • Bit_score: 444
  • Evalue 1.30e-121
phytoene/squalene synthetase similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 281.0
  • Bit_score: 438
  • Evalue 1.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCGAACCAGCTGGGCAGAACGCGGTGTTGCAGGGCTTCATCGACAAATGGCTGGCCGCGCAGCCGCAGCAGCGCGTGGCGCTGGCCTTCGTCGACGGCCGCCGCCATCCGGGCCACGTGGCGCTGGCCGCGCTGGAGCAGGAGCTGCTGAGCGCGGCTTACGGCATCCGCGAGCCGCAGGTGGCCGCCGCCAAGCTCGGCTGGTGGGCGGAGGAACTGGCCGGTGCGGCGGCCAGCGGCGGGCGGCATCCGCTCACCCAGGTGCTGTTCGATGACGAGCGCGCTCACGCGATCGCCACGGAGCTGTGGCTGGCGCCGGTATTGGCGGCGATGGCGCAGCTGGAGCAGGGCACGGCGGCCGATTACGCCGACCAACTGCAGGCGGCGATGCCGCTGCACGGTGCGCTGGCCGCACTGGAGACGGCATGGTGGTATGGCGCCGCGGCCTCGCCCGAGCGCGCGACCCGGGTGGCCGTGCTCAATCACTTGTTGCATGCCTTGTTGCACCTGGACGCAGACGCCGAACGCGACCGCCTGCCACTGCCGATGGCCCGGCTGGCACGCCACGGGCTGGATCGCGCGCAACTGCGCAAGCCTTGCGCACCGCGGCAGCAGGCGATCCGGGCGCAGTTGCAGGATTTGCTCGGCGACTGGCGCGCTGCCGATGCGCTGGGCGGGCCACTCAGCGTGTTTCGTGCACTCGAGTCGCGTCAGGCCTGCGCGCTGGCGCGCCGCGCGCTGCATGCCGACGAGGCACTGGCCGTGTTGCAGGCCGACTGGTCGCGCACGCCGTGGTCGACGCCGTGGCGGGCGTGGCAGGCCGCCCGTGCATGGCGGCGCCAGACACAGTAG
PROTEIN sequence
Length: 285
MSEPAGQNAVLQGFIDKWLAAQPQQRVALAFVDGRRHPGHVALAALEQELLSAAYGIREPQVAAAKLGWWAEELAGAAASGGRHPLTQVLFDDERAHAIATELWLAPVLAAMAQLEQGTAADYADQLQAAMPLHGALAALETAWWYGAAASPERATRVAVLNHLLHALLHLDADAERDRLPLPMARLARHGLDRAQLRKPCAPRQQAIRAQLQDLLGDWRAADALGGPLSVFRALESRQACALARRALHADEALAVLQADWSRTPWSTPWRAWQAARAWRRQTQ*