ggKbase home page

scnpilot_solids1_trim150_scaffold_3900_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 2718..3836

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 352.0
  • Bit_score: 659
  • Evalue 1.40e-186
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 352.0
  • Bit_score: 659
  • Evalue 4.50e-187
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGG90408.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 352.0
  • Bit_score: 659
  • Evalue 2.00e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCCACTGCGCATCCCGCCAGAACTCTGGTCAGGGCGTCAGCGGCAAGGGGGACACACCGTGGGGCTCTTTACACCGAAGAAGCCGGCGCTGATCGGCGTCGACATCAGTTCGACCGCCGTCAAGCTGCTGCAGCTGAGTCAGGCGGGCGGGCGCTATCGCGTGGAGCACTACGCGGTGGAACCGCTCCCGCCCAATGCGGTGGTCGAGAAGAACATCGTCGAGGTCGAGGCGGTGGGCGACGCGATCCGCCGCGCCCTGGCCCGCTCGGGTTCCAAGCTCAAGCACGCCGCCGCCGCGGTGGCCGGGTCGGCGGTGATCACGCGGATCATCCCGATGACCAGCGAGCTATCCGACGATGACCTCGAGGGCCAGATCCAGGTCGAGGCCAATCAGTACATCCCGTATCCGATCGACGAGGTCAGCCTCGATTTCGAGGTGATCGGCCCGGTACGCGACAACCCGGACATGAACAACGTGCTGCTGGCGGCCTCGCGCACCGAGAACGTCGACATGCGCGTGGCGGCGTTGGATCTGGGCGGCCTCACTGCCGGCGTCATCGACGTGGAGGCCTTCGCGATGGAGAACGCCTTCGCGATGGTCGCCGACCAGCTCAACGTCGGCCGCGACGCCCTGGTGGCGGTGGTCGACATCGGCGCGACCATGACCACGCTTTCCGTGCTGCGCAACCAGCGCACCATCTATTCGCGCGAACAGGTGTTCGGCGGCAAGCAGCTCACCGACGAGATCATGCGCCGCTTCGGGCTCTCCTACGAGGAGGCTGGCCGCGCCAAGCGCAAGGGCGGCCTGCCGGAGTCCTACGAGACCGAGGCGCTGGAGCCGTTCAAGGAGTCGCTGATCCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTTCGCCGGCAGCGAATACAGCAAGGTCGACCAGGTGGTGCTGGCCGGCGGCTGCGCCTCGATCGAGGGACTGGGCCCGATGCTGGAAGAGCAGCTCGGCGTGCCTTGCGTGGTCGCCAACCCGCTGGCCCGCATGTCGTTGTCGCCGCGGGTGCAGGCCCAGGCGCTGGCGCAGGATGCCCCGGCCCTGATGATCGCGGTCGGCCTCGCCCTGAGGAGCTTCGACTGA
PROTEIN sequence
Length: 373
MPLRIPPELWSGRQRQGGHTVGLFTPKKPALIGVDISSTAVKLLQLSQAGGRYRVEHYAVEPLPPNAVVEKNIVEVEAVGDAIRRALARSGSKLKHAAAAVAGSAVITRIIPMTSELSDDDLEGQIQVEANQYIPYPIDEVSLDFEVIGPVRDNPDMNNVLLAASRTENVDMRVAALDLGGLTAGVIDVEAFAMENAFAMVADQLNVGRDALVAVVDIGATMTTLSVLRNQRTIYSREQVFGGKQLTDEIMRRFGLSYEEAGRAKRKGGLPESYETEALEPFKESLIQQISRLLQFFFAGSEYSKVDQVVLAGGCASIEGLGPMLEEQLGVPCVVANPLARMSLSPRVQAQALAQDAPALMIAVGLALRSFD*