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scnpilot_solids1_trim150_scaffold_4717_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(1..1557)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 535.0
  • Bit_score: 785
  • Evalue 3.20e-224
Outer membrane protein {ECO:0000313|EMBL:EIM02160.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 535.0
  • Bit_score: 785
  • Evalue 4.40e-224
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 528.0
  • Bit_score: 771
  • Evalue 1.50e-220

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
GTGATACTCAAACACAACGTGCTTGCCTTGGCGCTGGCATCGGTCGGTTTCTGCGCATTCATTCCTGCCCACGCTGCCGCCCCGCGGGCCAGCAGCGCGACCGCTGCGCAGGACACCCAGGCCCAGGACGCCCAGACCCAGGATGCGACCACGACGGATACCAAGGCCGACAAGGATCGCCGCCGCTCCGCCAAGGACAACGCCAAGCAGCTGCAGGCAGTCGAGGTGAAGGGCTTCATCAGCAGTATCGAGAACTCCACCGCGCTGAAGCGCAACGCCAGCACCATCGTCGAGGCGGTGTCCGCCGAGCAGGTCGGCAAGTTGCCGGGCGTGTCCATCGCCGATGCGCTGGGTCGCCTGCCCGGCCTCGCCGTGCAGACCGTCAGCGGCCGTCCGCAGGTGCTGACCATCCACGGCCTGGGCCCGGACTTCTCCACCGCGCTGATCAACGGCGGCCAGCAGGTGTCCACCTCCAACAACCGCGACGTGCAGTTCGACCAGTACCCGTCGAGCTGGTTCGACAACGTGGTGGTGCACCTGTCGCCGTCGGCAAACCTGATCGGCCAGGGTCTCACCGGCACGGTGGACATGCATACCATCCGCCCGCTGGACAAGAACGGCCCGGAGGCGGCGATCAACGCGCGCTACATCTGGAACGGCATGTCGCAGCTGGCCGACGGCCCGGGCGTGAGCAACAAGGGTCACAACGTCAACGGCGTGTGGGTGCACCAGTTCGCCAACAACACGCTGGGCGTGACGCTGGGCGTGGACCTGGAAGACAGCCCGTCGCAGATCGAGCATCAGCAGCCGTGGGGCTACCCCACCGACGCCAACGGCAACTACGTCATCGGCGGCTCGAAGAACTACGGCATCACCGATTCGATGAAGCGCAGCGGCCTGCTCGCCACCGTGCAGTGGCGGCCGAACGAGCACTACACCGGCACCGTCGACCTCACCTTCGACGATTTCAAGGAAGTGCAGCAGGCCAAGGGCATGGAGTTCCCGCTGTTCTGGAGCTCCGCGCAGCTGCAGCCGGGCGGCACGGTGCAGGACGGTTTCATCACCAGCGCTGCGTACACCAACGTCAAGCCGGTGATCCGCAACGACTACAACCGCACCAAGGCGCGGGTCTACAACTTCAACTGGGACAACCAGTTCACCATCAACGAGAACTGGTCGATCGACGCCGACGTCAACTACTCGCGCGCCACCCGCGACGACATCAACCTGGAGAGCTACTCCGGCACCGGCTTCACGGCGGCCAACGGCGCACTCGACACGATCGGCTTCAACCAGATCGACAGCGGCCTGTTCTATTTCTTCCCGACGCTCGACTACAACCAGGGCGTCGTGTTGACCGATCCGCAAGGCTGGGGCGGCGGCAACGACGTGGTGCAGGCCGGCTTCATCAACGCGCCGCACACCGTCGACTACCTCGCCAACCTGCGCCTCGCCGCGCAGCGCAGCTTCGCCAGCGGCCCGATCGCCAGCGTGGAATTCGGCGTGGCGCACAGCACGCGCAACAAGACCTACCACATCGACCAGAGCTTCCTGACC
PROTEIN sequence
Length: 519
VILKHNVLALALASVGFCAFIPAHAAAPRASSATAAQDTQAQDAQTQDATTTDTKADKDRRRSAKDNAKQLQAVEVKGFISSIENSTALKRNASTIVEAVSAEQVGKLPGVSIADALGRLPGLAVQTVSGRPQVLTIHGLGPDFSTALINGGQQVSTSNNRDVQFDQYPSSWFDNVVVHLSPSANLIGQGLTGTVDMHTIRPLDKNGPEAAINARYIWNGMSQLADGPGVSNKGHNVNGVWVHQFANNTLGVTLGVDLEDSPSQIEHQQPWGYPTDANGNYVIGGSKNYGITDSMKRSGLLATVQWRPNEHYTGTVDLTFDDFKEVQQAKGMEFPLFWSSAQLQPGGTVQDGFITSAAYTNVKPVIRNDYNRTKARVYNFNWDNQFTINENWSIDADVNYSRATRDDINLESYSGTGFTAANGALDTIGFNQIDSGLFYFFPTLDYNQGVVLTDPQGWGGGNDVVQAGFINAPHTVDYLANLRLAAQRSFASGPIASVEFGVAHSTRNKTYHIDQSFLT