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scnpilot_solids1_trim150_scaffold_4426_8

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(4333..7047)

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 904.0
  • Bit_score: 1604
  • Evalue 0.0
  • rbh
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 904.0
  • Bit_score: 1604
  • Evalue 0.0
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 904.0
  • Bit_score: 1604
  • Evalue 0.0
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2715
GTGACCAGAAAAACTCCCCCCACGTCCGGCCGTTCCCCGGATGCGCGCCCCCCGAAGAAAACCGGCAGTCGCTCGTCGCGCGGGCCATCCGCGCCGGACAAGCGCGGCAAGGCTGCCACCGGCGCCGTGCGCGACCCGCATGCCAATCGCGAGGCACAGCGCTATGCGCGCCCCATCCCCAGCCGCGAGGCGATCCTCGCCCTGCTGGAAGAGCGCGGCGAACTGCTGACCGAAGCGCGCATCGCCGACGCGCTGCAGATTCACGATGAAGTCGACCTCGAGGCACTGCGCAAGCGGCTCGCGGCGATGGTGCGCGATGCCCAGTTGCTGCTGGGCCGGCGCGGCGGCTACGCGCCGACGCGCAAGCTCGACCTGATCGCCGGCCGCGTGCTGGCCAACGCCGAGGGCTACGGGTTCCTGCGCCCCGACGAGGGCGGCGAAGACCTGTACCTGTCGCCGCAGCAGATGCGTACGGTGCTGCATGGTGATCGCGTGCTGGCCAGCGTGGTCGGCATCGACCGTCGCGGCCGCAAGCAGGGTGCGATCGCCGAAGTGCTGGAACGTCGCTCGCCGCGCCTGGTCGGCCGCGTGTTGATCGAGGATGGCGTCACCCTGGTCACGCCCGACGATCGCCGCCTGAACCAGGACGTGATCATCAAGCCGGGCCAGGAGCAGAGCGCCGAGTCCGGCCAGATCGTGGTGGTGGAGATCACCGACCCGCCGACGCCTTACCGCGGTCCGCTGGGCGAGATCCGCGCGGTGCTGGGCAATCGCCTGCAGCCCTCGCTGGTGGTGGAGATGGCGATCGCCAGCCACGACCTGCCGCACGAATGGCCGGCCGAAGTGTTGCGTGATGCGGCGCAGGTGGAAGCGGAGGTGACCGCTGCCGAGCGGGAAGGCCGTACCGACATCCGCAAGCTGCCGCTGGTCACCATCGACGGCGCCGATGCCCGCGACTTCGACGATGCGGTGTATGCCGAGCCGAAGCGTGGTGGTGGCTGGCGGCTGATCGTGGCGATCGCCGACGTGTCGCACTACGTGCAGGCAGGCAACGCGCTGGATCGCGAGGCATACGAGCGCAGCACGTCCACCTATTTCCCCGGCTTCGTCGTGCCGATGCTGCCGGAGACGCTTTCCAACGGCATCTGCTCATTGAACCCGAAGGTCGAGCGGCTGTGCATGGTCTGCGACATGACCGTCGACGCCGAGGGCAACGTCGCCCGTTCGAAGTTCTACGACGCGGTGATGCGCTCGCATGCGCGGCTGACCTACGACAAGGTGTGGCAAGCGGTCGGCCTGCGCGAGAAGGACGCACGCCACGAAGTCGCCGACGTGCTGCCGCAGCTCGAGAACCTGCACGCGCTGTACAAGGCGATGGCGGCGCAGCGCAAGCGCCGCGGCGCGATCGACTTCGAGACGCCGGAGGTGAAGTTCCGTCTCGACCAGAGCGGCGGCGTGGAGTCGATGGGTGCCACCGAACGCAACGACGCGCACAAGCTGATCGAGGAGTGCATGATCGCGGCCAATGTGCAGGCCGCGCTGTTCCTGGAGAAGAGGAAAATCCCCGCGCTGTTCCGCGCACACGAGCCGCCGCCGGCGGAGAAATACGAGGACCTGCAGCAGTTCCTGCGCGAGTTCAAGCTGCGCATGCCGCCGGTGGAGGAGGTGACCCCGGCCGACTTCTCCGAGATCCTCGCACTGGTGCGCGATCGCCCCGAGCGCGAACTGATCCAGAGCGTGCTGCTGCGCTCGCAGCTGCTGCGCTCGCAGAGCATGGCCGCCTACCAGCCCGACAACCGCGGCCACTTCGGCCTGTCGCTGCAGGCGTACGCGCACTTCACCTCGCCGATCCGTCGTTATCCCGACCTGCTGGTGCATCGCGCGATCCGTTACGCGCTGGCCGGCGGCAAGCCCAGCGACTACACCTACACGCCCGCCGAGGTGGCGGCGATGGCCGTGCATTGCTCGCAGCGTGAGCGTCGTGCCGAGGAGGCCGAGCGCGACGTGGACGAGCGCTTCAAGTGCGCGTGGATGGAGAAGCACATCGGCAGCGAGTTCGACGGCGTGGTCACCGGGGTCACCTCGTTCGGCCTGTTCGTGGAGCTGGACGAATCGAAGGTTTCCGGCCTGGTGCACATCAGCCAGCTGGTGAACGACTACTACCACTTCGACGCGGTGCGCAAGCTGCTCAAGGGTGAGCGCACCGGCGCGCAGTTCCGCCTCGGCGACCACGTGCGCATCCAGGTGCTGCGCGCCAGCCTGGAGGATCGCAAGATCGACTTCCGCCTGGTCTCGCCGCGCACGTCGGCCCCGGCCCCAGCCCCGACCGGCAGCGGCAAGGCGTATGACTATGCCGCCGCGGGCGAGCGCTATTCGCTGCCGAAGAAGGCGGCCGCCACGACCAAGGCACCGGGCATGTTCGGTCGCGCCGCCAAGGCGATCGGCCGCGCATTCGGCCGCAAGGAGGCCGAGGTTGCCACACCGGCGCCGGCCCCGCGCAAGGCTGCGGCGAGCGATAGTCCGCCGCCGCGTGCACAGCCGCCGGCAGGGCGCCAGCATGCCGGCGGCCAGCATCAGGGCCGCAGGGTCGAACCGTCGTCCGATCGTCGCCCGCGCAAGGACGGTTCCGCCAGGCGCGCGCCGGCCCCGGCTGCCGTCCCGCCGGCGCCGAAGAAGCACGGCGGCCGCAAACCGAAACCGAAAGGCAAGCCATGA
PROTEIN sequence
Length: 905
VTRKTPPTSGRSPDARPPKKTGSRSSRGPSAPDKRGKAATGAVRDPHANREAQRYARPIPSREAILALLEERGELLTEARIADALQIHDEVDLEALRKRLAAMVRDAQLLLGRRGGYAPTRKLDLIAGRVLANAEGYGFLRPDEGGEDLYLSPQQMRTVLHGDRVLASVVGIDRRGRKQGAIAEVLERRSPRLVGRVLIEDGVTLVTPDDRRLNQDVIIKPGQEQSAESGQIVVVEITDPPTPYRGPLGEIRAVLGNRLQPSLVVEMAIASHDLPHEWPAEVLRDAAQVEAEVTAAEREGRTDIRKLPLVTIDGADARDFDDAVYAEPKRGGGWRLIVAIADVSHYVQAGNALDREAYERSTSTYFPGFVVPMLPETLSNGICSLNPKVERLCMVCDMTVDAEGNVARSKFYDAVMRSHARLTYDKVWQAVGLREKDARHEVADVLPQLENLHALYKAMAAQRKRRGAIDFETPEVKFRLDQSGGVESMGATERNDAHKLIEECMIAANVQAALFLEKRKIPALFRAHEPPPAEKYEDLQQFLREFKLRMPPVEEVTPADFSEILALVRDRPERELIQSVLLRSQLLRSQSMAAYQPDNRGHFGLSLQAYAHFTSPIRRYPDLLVHRAIRYALAGGKPSDYTYTPAEVAAMAVHCSQRERRAEEAERDVDERFKCAWMEKHIGSEFDGVVTGVTSFGLFVELDESKVSGLVHISQLVNDYYHFDAVRKLLKGERTGAQFRLGDHVRIQVLRASLEDRKIDFRLVSPRTSAPAPAPTGSGKAYDYAAAGERYSLPKKAAATTKAPGMFGRAAKAIGRAFGRKEAEVATPAPAPRKAAASDSPPPRAQPPAGRQHAGGQHQGRRVEPSSDRRPRKDGSARRAPAPAAVPPAPKKHGGRKPKPKGKP*