ggKbase home page

scnpilot_solids1_trim150_scaffold_4300_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(3639..4409)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WY31_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 259.0
  • Bit_score: 353
  • Evalue 2.00e-94
response regulator of the LytR/AlgR family similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 259.0
  • Bit_score: 349
  • Evalue 6.90e-94
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 254.0
  • Bit_score: 365
  • Evalue 7.10e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGGCTAAGGGTGTGATCGCCGAAGACGAGGTCTTGCTGCGCCAGTCGCTGCGTGCCGCGCTGGAGACGGCATGGCCGCAACTGGACATCGTCGCCGAGTGCGAGGACGGCGCCAGCGCGCTGGAGGCGATCGTCGAGCATCGGCCCGAGGTGGCTTTCCTCGACATCCGCATGCCGGGCCTGACCGGGCTGGAGGTCGCCACCGCCGCGGCCGAGGCGTGCCCGGCGACCCAGGTGGTGTTCGTCACCGCGTATGACCAGTACGCCATCGACGCCTTCGAGCGCGGCGCGATCGACTATCTGCTCAAGCCGGTCGTCCCGGAACGGTTGCGCGCCACCGTGGAGCGCGTGCAGTCGCGCGTGGGCGCGGATCGGTCCGACACTGCCTCGCTGGCCGACCTGGTCCGGCAGATCGGCAGCCGGCTGGGGCCGGCGCGCCAGCAACCGCCGCTGAGCTGGGTCACCGCCAGCACGGGACGGGAAACGCGGCTGATCCTGCTCGACGACGTCGCCTATTTCCGCGCCGACAACAAATACACCACGGTGGTCACTGCCGAGGGCGAGGCGCTGCTGCGCACTCCGATCCGCGAGCTGCTGGAGGTGCTCGACCCGACCGTGTTCAAGCAGATCCACCGCGGCACCGTGATCAACATGAAGGCGGTCGCCGCCGTCACCCGCGACGACACCGGCAAGGGCATCGTGCGCCTGCGCGAGCGGCCGGAAACGCTCAGCGTGAGCGCGCCGTTCATGACCCTGTTTCGCAACATGTAA
PROTEIN sequence
Length: 257
MAKGVIAEDEVLLRQSLRAALETAWPQLDIVAECEDGASALEAIVEHRPEVAFLDIRMPGLTGLEVATAAAEACPATQVVFVTAYDQYAIDAFERGAIDYLLKPVVPERLRATVERVQSRVGADRSDTASLADLVRQIGSRLGPARQQPPLSWVTASTGRETRLILLDDVAYFRADNKYTTVVTAEGEALLRTPIRELLEVLDPTVFKQIHRGTVINMKAVAAVTRDDTGKGIVRLRERPETLSVSAPFMTLFRNM*