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scnpilot_solids1_trim150_scaffold_6372_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 102..1511

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 465.0
  • Bit_score: 827
  • Evalue 6.60e-237
two component, sigma54 specific, Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 449.0
  • Bit_score: 507
  • Evalue 4.70e-141
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 466.0
  • Bit_score: 832
  • Evalue 3.70e-238

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGCTGGAAGACATGACACGCGAAACCCATCCCCTCGTGCTGCTGGTCGACGACCAGGCCGACGTGCGCGAGGCGCTGCGCCTGCTGCTGAAGTCCGAGGGCATCGCCAGCGTCGGCGTCGACGGCCCGACGGCGGCGCGGGAGGCGGTGCGCCAGCGCGAGTTCAGCTGCGCGCTGATCGACCTCAACTACACCCGCGACACGACCTCGGGCGAGGAGGGCCTGGCCCTCCTCGATGCGTTGCGCCAGCACGCGCCGGAGTTGCCGGTGGTGGTGATGACCGCGTGGGGCAACGTGCCGCTGGCGGTGGATGCATTGCGCCGCGGTGCCGGCGATTTCATCGAGAAACCGTGGGACAACACCCGTGCGCTCAGCATCGTGCGCACGCAGATTGCATTGGGCGAAGGTGCGCGACGGCAGCGTCGGCTGGAAGCGGAGAACGCATTGTTGCGCGGCGGCGGCGAGGCGCTGATCGCCGAGTCGCCGGCGATGCGGCGGGTGATGGAGCTGGTGGCCCGGGTCGCTCCCAGCGACGTCAATGTGCTGGTGCTGGGTGAAAACGGTACCGGCAAGGGCGTGATCGCCCAGGCTTTGCATGCGCAGTCGCGTCGCGCGGCGAAAGCGCTGGTCAAGGTCAACATGGGCGGCATCGCCGAGAACGTGTTCGAGTCGGAGATGTTCGGCCACGTGCGCGGCGCGTACACCGACGCCAAGAGCGAGCGCATCGGCCGCTTCGAACTGGCCGACGGCGGCACGCTGTTTCTCGACGAGGTGGGCAACGTGCCGGCGTCGCAGCAGCCGAAGTTGCTGCGCGTGCTGGAGGATGGCGAGTTCGAGCGGCTTGGTTCCTCGCGCACGCAAAGCGTGGACGTGCGGCTGGTCTCGGCGACCAATGCCGATCTTGCCGCCGAGGTGGTGGCCGGCCGTTTCCGCAAGGATCTGCTGTATCGCCTCAACACGCTGGAGATCTACCTGCCGCCGTTGCGCGAGCGTCGCGACGACGTCCTGCCGCTGGCGCGCTGCTTTCTCGAACGCAGCGCGGCGCGCTACGGCCGCCACGGCCTGCGGCTGGCGCCGTCGGCCGAGCGCGCCCTGCTGGCGTGGCGCTGGCCGGGCAACGTGCGCGAACTGGGCCACCTGATGGAACGCGCCGCGCTGCTGGCCGAGCAGGACCTGGTCAGCGACTCGGCGCTGGCCTTCGGTCCCGGCTCGGCGGGGGCGGAATCCGCGTCCGATATCGATGGCATGACCATCGACCAGGCCGAGGCGCACCTGGTGCGGCGGGCGCTGGAACGCCACGGCGGCAACCTGCAGCACGCCGCCGACGCACTCGGCATCACCCGCCAGACCTTGTACCGGCGCATGGAAAAGTACGGGCTGCGCGATCCCTCGTCCGACGATGCCGACTGA
PROTEIN sequence
Length: 470
MLEDMTRETHPLVLLVDDQADVREALRLLLKSEGIASVGVDGPTAAREAVRQREFSCALIDLNYTRDTTSGEEGLALLDALRQHAPELPVVVMTAWGNVPLAVDALRRGAGDFIEKPWDNTRALSIVRTQIALGEGARRQRRLEAENALLRGGGEALIAESPAMRRVMELVARVAPSDVNVLVLGENGTGKGVIAQALHAQSRRAAKALVKVNMGGIAENVFESEMFGHVRGAYTDAKSERIGRFELADGGTLFLDEVGNVPASQQPKLLRVLEDGEFERLGSSRTQSVDVRLVSATNADLAAEVVAGRFRKDLLYRLNTLEIYLPPLRERRDDVLPLARCFLERSAARYGRHGLRLAPSAERALLAWRWPGNVRELGHLMERAALLAEQDLVSDSALAFGPGSAGAESASDIDGMTIDQAEAHLVRRALERHGGNLQHAADALGITRQTLYRRMEKYGLRDPSSDDAD*