ggKbase home page

scnpilot_solids1_trim150_scaffold_2553_14

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_64_96

partial RP 5 / 55 BSCG 5 / 51 ASCG 6 / 38
Location: comp(13719..14435)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain-containing protein id=12493761 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 478
  • Evalue 5.00e-132
  • rbh
RNA-binding S4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 240.0
  • Bit_score: 277
  • Evalue 4.00e-72
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 349
  • Evalue 3.70e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGACCGATTCCATCCGCCTTGCCAAACGTGTCGCCGAGCTCCGCCACTGCTCGCGCCGCGAAGCGGAGCTCATCATCACCGGCGGTTGGGTGCGGGTGGACGGGGTGGTGGTCGAGGAACCGCAGTTCCGCGTCAGCGACCCCCGCATCGAAATCGACCCCAGGGCCGATCCCGGCCAGGCTGAGCCCGTCACCCTGCTAGGGCACCAGGTGTCCGGACCAGACCTTGGCGACAGGCCCGTGCCGCCGCTGCCCGACGCCGCCACGCTATGGGCCGAAGACGTCTCCGGCATCCGCCCGCTGAAAAAGCACTTCGCCCGGCTGAACGTGTGCATGCCCCTGGAAGCCTGCGCCAGCGGTCTTGTCGTCTTCAGCCAGGACTGGCGCATCGTGCGCAAGCTGACCGAAGACGCCGCCACACTGGAACACGAAGTCATCGTCGAAATCGCGGGCGAACTGGCCGCCAGCGGGCTCGGGCGGCTGAACCAGGGTATTGCCTTCCGGGGCCGCGTGCCCGCCTCCATCAAGGTCAGCCGGCAGAGCGAGACCCGTCTGCGGATCGCGCTGAAAGGCCTCCGGCCCGGGCAGATTCAGCACATGTGCGAATCCGTCGGTCTCAAGGTTCTGTCGATGAAACGTATCCGCCTCGGCCGCATCCCGCTGGGGAAACTGCCGCCGGGACAGTGGCGCTATCTGCACGCAGGCGAGCGCTTTTAA
PROTEIN sequence
Length: 239
MTDSIRLAKRVAELRHCSRREAELIITGGWVRVDGVVVEEPQFRVSDPRIEIDPRADPGQAEPVTLLGHQVSGPDLGDRPVPPLPDAATLWAEDVSGIRPLKKHFARLNVCMPLEACASGLVVFSQDWRIVRKLTEDAATLEHEVIVEIAGELAASGLGRLNQGIAFRGRVPASIKVSRQSETRLRIALKGLRPGQIQHMCESVGLKVLSMKRIRLGRIPLGKLPPGQWRYLHAGERF*