ggKbase home page

scnpilot_solids1_trim150_scaffold_2644_10

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_64_96

partial RP 5 / 55 BSCG 5 / 51 ASCG 6 / 38
Location: 7985..8662

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] id=12493857 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 451
  • Evalue 6.10e-124
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 226.0
  • Bit_score: 420
  • Evalue 2.80e-115
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 226.0
  • Bit_score: 420
  • Evalue 1.20e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGGTGCCGGAAGAGGGCGGCGACGACCTCTATCTGTCGCCCAAGGAAATGCACCGCGTGCTGCACGGCGACAAGGTGCTCGTGCGGGTGGCCGGCTTCGACCGCCGCGGTCGGCGCGAAGCCAAGATCGTCGAGGTGCTGGAGCACGTCAACCGGTTCGTCGTCGGCCGCTACTACCTCGAAGGAGGCGTCGGCTTCCTGATTGCCGAAAACCGCCGCATCAACCAGGATATCCTGGTCCCGCCAGAAAACGCAGGCAACGCACAATCCGGCCAGGTGGTCATGGTGGAAATCCTCACCCAGCCCGGTGCGCACAACGAGGCGGTGGGCCGTGTCAGTGAAGTCCTGGGCAGTTTCACCGCACCCGGCATGGAAATCGAGATCGCGCTGAGGAAGCACGACCTGCCTTATGTGTTCCCGCCCGAGGCGGAAGAACAGGCGAAGAAACTGCCGGCCAAGGTGCTGAAAAAGGATTTGACGGGGCGCGAGGACATCCGCCATCTGCCGCTGGTCACCATCGACGGCGAAACCGCGCGCGACTTCGACGACGCCGTGTACTGTGAATCGCTCGGTCGCAGCGGCTTCCGCCTGGTGGTGGCGATCGCCGACGTCAGCCATTATGTGAAACCGCGCGATGCGCTCGACAGCGAAGGCTTCAACCGCGGCAACTCGGTGTAC
PROTEIN sequence
Length: 226
VVPEEGGDDLYLSPKEMHRVLHGDKVLVRVAGFDRRGRREAKIVEVLEHVNRFVVGRYYLEGGVGFLIAENRRINQDILVPPENAGNAQSGQVVMVEILTQPGAHNEAVGRVSEVLGSFTAPGMEIEIALRKHDLPYVFPPEAEEQAKKLPAKVLKKDLTGREDIRHLPLVTIDGETARDFDDAVYCESLGRSGFRLVVAIADVSHYVKPRDALDSEGFNRGNSVY