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scnpilot_solids1_trim150_scaffold_2196_8

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(7998..8819)

Top 3 Functional Annotations

Value Algorithm Source
TagH id=2525116 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 275.0
  • Bit_score: 314
  • Evalue 8.30e-83
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 280.0
  • Bit_score: 171
  • Evalue 4.70e-40
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 275.0
  • Bit_score: 305
  • Evalue 9.30e-80

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Taxonomy

BJP_IG2103_SUB10_Xanthomonadales_61_45 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGGATGCCATCCTCGCCTTTGCCGATATCGGCGACTACATCGACGAGCCGGTCAAGACCTACAGCTCGGGCATGGCGCTGCGGCTGGCGTTCGCGGTGCAGGTACATACCGACCCGGACATCCTGATCGTGGATGAGGCGTTGGCGGTGGGCGACGCCGCGTTCCAGGCCAAGGCGATGGCACGCATCGACGAGATCCTGCGGCGCGGGACCACGCTGTTGTTCGTCGGCCACGACCTCAATGCGGTGAAAGCGTTCTGCCATCGCGCGATGCTGCTGGAGAAGGGCCGCATCGTGCTTGAGGGCCTGCCGGACGAGGTCATCACCGAATACCTTCATCGCACCCACAAGCGCGCGCTGGCCGCGCAGCAGGATGCGCGTGCGGATGCGCTGGAGCGACTCGACGGCGGCTACGGTTTGCAGGATGCCTGCGTAGCGCGTGCCAGCGTCAACGGCGTGCGGCATGCGTCGCTGGCGCATGGCGATGCTCTGTGTTTCGAACTGGCGGTGCGCCGCAACGCCGGCATCGAAGCGCCTTGCCTGATCTTCGACATCCTCGATGGACGCGGCCTGCAGCTGACCGGACGACGCATCGCGCTGGGTCGGGGCGCGGGCGAGGCCACTGTGCGGATCAGGCTGGACGCCGCATTCCAGCAGGGCATCTACCGGGTGCGCACGCGGGTCGTGGATGCCCCTTCGCTGGACCGCACCATGGTGCTGGCGCGGCAGGAGGGTTGGCTGTCGTTCGAGGTGGTGGACGACAGCCGACACTTGTTCACTGGCCTGTTCCCGGTGCCGATGGCGATCGAGGTCGGCAGCTGA
PROTEIN sequence
Length: 274
MDAILAFADIGDYIDEPVKTYSSGMALRLAFAVQVHTDPDILIVDEALAVGDAAFQAKAMARIDEILRRGTTLLFVGHDLNAVKAFCHRAMLLEKGRIVLEGLPDEVITEYLHRTHKRALAAQQDARADALERLDGGYGLQDACVARASVNGVRHASLAHGDALCFELAVRRNAGIEAPCLIFDILDGRGLQLTGRRIALGRGAGEATVRIRLDAAFQQGIYRVRTRVVDAPSLDRTMVLARQEGWLSFEVVDDSRHLFTGLFPVPMAIEVGS*