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scnpilot_solids1_trim150_scaffold_2765_6

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(4864..5388)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FL74_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 174.0
  • Bit_score: 240
  • Evalue 1.70e-60
Type IV pilus biogenesis protein PilP {ECO:0000313|EMBL:KGQ20091.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 171.0
  • Bit_score: 244
  • Evalue 9.50e-62
pilP; Tfp pilus assembly protein; K02665 type IV pilus assembly protein PilP similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 174.0
  • Bit_score: 235
  • Evalue 9.90e-60

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCGCCTGTCATCGCTTCGTCGCGTCTTCCGCCTGGCGTCAGTGTTGCTCCTGTGCGGTCTGCTGGCCGCCTGCGGCAGCGGTCGCGGCGACCTCGAAAAGTGGGTGGCGGAGGTGAAGGCCAAGCCGGCCCCGCCGCTGGAACCCCTCCCGGTCATGCAGCAGTTCGAAACGTTCGAATACACCGCGCAGAACATGCGCGACCCGTTCGACCAGGCTTTCAGTGGCGAAGGTTCCAGCAGCGGCCCGCGTCCCGACCCGGGCCGGCGCAAGCAGACGCTGGAGATGTTCTCGCTGGACAGCCTGAAGATGGTGGGCTCGCTGGGGGGCGGCAAGAACCTGGTGGCGCTGGTGATGGCCCCGGACAAGGTGACCTACCGGGTAACGCCCGGGGCTTACCTGGGGCAAAGCGACGGCCGGGTGACCGGCGTCTACGAAGACCGGATCGAACTGGTCGAACTGGTTCCGGATGGCGCAGGCGGCTGGCTGGAACGTCCCGCCAAGCTGGCGCTCGAAGACAATTGA
PROTEIN sequence
Length: 175
MRLSSLRRVFRLASVLLLCGLLAACGSGRGDLEKWVAEVKAKPAPPLEPLPVMQQFETFEYTAQNMRDPFDQAFSGEGSSSGPRPDPGRRKQTLEMFSLDSLKMVGSLGGGKNLVALVMAPDKVTYRVTPGAYLGQSDGRVTGVYEDRIELVELVPDGAGGWLERPAKLALEDN*