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scnpilot_solids1_trim150_scaffold_2965_3

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1832..2146

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 109.0
  • Bit_score: 90
  • Evalue 1.40e-15
ATP-dependent RNA helicase; K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 98.0
  • Bit_score: 65
  • Evalue 1.40e-08
ATP-dependent RNA helicase RhlB n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UG46_XANAP similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 98.0
  • Bit_score: 65
  • Evalue 4.40e-08

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
GTGGAAGGCGATGCCGCCGCCGCGCCGAAGCCCGCGGTGGCGCAGGCGCAGCCGGCAGCGGCCGAAGGCGATGCGCCGGCGCGCAAGCGTCGCCGCCGCCGCGGCGGACGGCCGCTGGAAGGCGCCGAGGGTGCAGCGCAGGCACAGGCGGCCACGCCGCAGCAGCCGGCCAAGCCGGCGGCGCCGAAGTACGTGCCGGCGAACAGGGCCGCCGCCGGCAGCGCCGCGTCCACTGCCGACAAGCCCTCGTTGTTCAGCCGCATCGGCCGCGGGCTGAAGTCGCTGGTGACCCGCACGCCCAGCAAGCAGCACTGA
PROTEIN sequence
Length: 105
VEGDAAAAPKPAVAQAQPAAAEGDAPARKRRRRRGGRPLEGAEGAAQAQAATPQQPAKPAAPKYVPANRAAAGSAASTADKPSLFSRIGRGLKSLVTRTPSKQH*