ggKbase home page

scnpilot_solids1_trim150_scaffold_1824_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(2867..3934)

Top 3 Functional Annotations

Value Algorithm Source
poly(R)-hydroxyalkanoic acid synthase subunit PhaE n=1 Tax=Pseudomonas geniculata RepID=UPI00029AF764 similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 320.0
  • Bit_score: 169
  • Evalue 5.60e-39
PHA synthase subunit {ECO:0000313|EMBL:EYR69599.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 261.0
  • Bit_score: 219
  • Evalue 6.60e-54
phaE; putative polyhydroxyalkanoate granule associated protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 308.0
  • Bit_score: 165
  • Evalue 3.30e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCGGACGCATCCAATGATTTCGCGGCGCTGACGCGCCAATATCTGGACTTGTGGGGGCAGGCGCTGCGCGGGAGCGCGCCACAGCCCGCCGCTGTGGGCGTGCCCGGGCTGAACGACATGTTGGAGGCGTGGGGGCGCCAGGCCGGCGGGCAGGGTGGGCTCGGCCCCGCGATGGAGCACTTCAACCGGCAGAGCAGCGAATGGTATGCGCAGATGCAGCAGGTGGCGTCGCGGTTCAGCGGCCGCGACCACAGCGCGGGCGACGTTGCCGGCGCTTGGCGCGAGGCGTTTGCCGGCACCCACCCGTTCGCAGGGCTGATGGAAAGCATGCGCGGGCCGGGGCTGGAAACCATCGCGCAGTGGGGGGAGGCGGGCATGCCGTCGCTCCACGGCCTGCGCGCGGAGACCGCAGCGGCGATGCGGATGCCGGCATTCGGCTTCGCCCGCGAGCACCAGGAGCGGTTGCAGGCGCTGGCGCTGGCGCAGTTGCGCTGGCAGGAGGCGCAGCAGGATTACGGCAGGCTGATGGCGAAGGCGTCGCGCGACGCGTTTTCGCGCTTCGAATCCAAGCTGGCCAGCCACGAGGAGCCCGGCCGGCAGATCTCCAGCGTGCGTGCGCTGTTCGATCTGTGGGTGGAGGCTGCGGAGGAGGCCTGGGCGGAGTTGGCNNNNNNNNNCGCGCCAGCGCGCCGCCGCACAGGCCATTGGCGAGCAGGTGGCCAGCACCTACGGCTGGCCGGAGCGCGGCGAGCTGGACAGCGCCCACCGCAAGATCGCCGAGCTGGAGCGCCAGCTGCGGCGCATGCAGCGCGCGCCCGTGCCGGCGGCTGCCGGCGACGTGGAACCGCGCAAGGCGCCGTCGAAGCGGACGCCCGGGGCCAAGAAGCCGCCCGCGGCCAAGGCTGCATCGGCCAATGCGCCGGCGAAGAAAGCGCCGGCAGCGGGTGCGGCCAGGAGAGTTGCGACGAAAATGGCAGGGAAGATCGTGAAGCCGGCCGCGAAGGACAGTGCGGCCGGGGTGAACGCGCGCGCGGGCAAGCCCGCCGCCAGGAGGCGTTGAGATGA
PROTEIN sequence
Length: 356
MADASNDFAALTRQYLDLWGQALRGSAPQPAAVGVPGLNDMLEAWGRQAGGQGGLGPAMEHFNRQSSEWYAQMQQVASRFSGRDHSAGDVAGAWREAFAGTHPFAGLMESMRGPGLETIAQWGEAGMPSLHGLRAETAAAMRMPAFGFAREHQERLQALALAQLRWQEAQQDYGRLMAKASRDAFSRFESKLASHEEPGRQISSVRALFDLWVEAAEEAWAELXXXXAPARRRTGHWRAGGQHLRLAGARRAGQRPPQDRRAGAPAAAHAARARAGGCRRRGTAQGAVEADARGQEAARGQGCIGQCAGEESAGSGCGQESCDENGREDREAGREGQCGRGERARGQARRQEALR*