ggKbase home page

scnpilot_solids1_trim150_scaffold_1824_15

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(14136..15530)

Top 3 Functional Annotations

Value Algorithm Source
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 457.0
  • Bit_score: 650
  • Evalue 2.00e-183
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 460.0
  • Bit_score: 643
  • Evalue 4.20e-182
Fumarate hydratase class II n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CLK7_XANCA similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 460.0
  • Bit_score: 643
  • Evalue 1.30e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGGTCAGCAAATCCAGTGGTTTCCGCAGCGAACACGACAGCATGGGCAAGCTGCAGGTGCCCGCCGATGCGCTGTGGGGGGCGCAGACCCAGCGCGCGGTGGACAATTTCCACATCTCCGGACGGCCGATGCCGGCGGCGTTCATCCGCGCGCTGGCGCTGGTGAAAGCCTCGGCGGCGCTGGTCAATGGGCACCTGGGGCTGCTGGATGGCAAGCGCGCCGACGCCATCGTCGAAGCCGCCACCGCCGTGGCCGGCGGCGCGCATGCCGACCACTTCCCGATCGACCGCTACCAGACCGGCTCCGGCACCTCGTCCAACATGAATGCCAACGAGGTGATCGCCCATCTCGCCGGCAAGGCGAGCCGGCTCGCCATCCACCCCAACGACCACGTCAACCTGGGCCAGAGCAGCAACGACACCATTCCGACCGCGCTGCGGGTGATGGCGGTGCGCGAAACCGAAGCCACGCTGCTGCCGCAGCTGGAGCATCTGCGCAATACCATCGACGCCCAGGCCAAGGCGATCGGCGCCGTGGTGAAGACCGGACGCACCCATCTGATGGATGCGATGCCGCTGACCTTCGCCCAGGAGTTCGGCGCCTGGGAGGCGCAGCTGGCGTCGGCGCAGGCGCGGATCGAGGACAGCCTGAAGCGGGTGGCGCGGCTGCCGATCGGCGGCACCGCCATCGGCACCGGCATCAACGCCCATCCGAAGTTCGGCAAGGCCGTGGCGAAGGCGCTGAATGCCGCCACCGGCCTCGGCTTCAGCCAGAATCCGAATACCTTCGAAGGGCTGGCCGCGCAGGATGATCTGGTGGAGCTGTCCGGCCAGCTGAGCGCGCTGGCGGTGGCGTTGATGAAGATCGGCAACGACCTGCGCTGGATGAATTCCGGCCCGCTGGCGGGACTGGGGGAAATCGAGCTGCAGGCGCTGCAGCCGGGCAGCTCGATCATGCCCGGCAAGGTCAATCCGGTCATTCCCGAGGCGCTGTGCATGGTCTGCGCACAGATCATGGGCCTGCACCAGGCCAATACGGTGGCCGGCCAGAGCGGCAACTTCCAGCTCAACGTGATGCTGCCGCTGCTGGCCAGCAACCTGGACGAGGCTATCGGCCTGCTGGCGAACGGCATGCGCGAGCTGGCCGACAACGCCATCGCCACGCTGAAGATCCGCCGCGACGTGGTGGCGCAGGCGCTGGATCGCAATCCCATCCTGGTCACCGCGCTCAACCCGGTGATCGGCTACGAGAAGGCCGCGAAGATCGCCAAGCGTGCCTACGCCGAGCAGCGCCCGGTGCTGGAAGTGGCGCTGGAAGACAGCGGCCTGGCTGAAAAGCAGCTGCGCAAGCTGCTGGAGCCTGCAGCACTGACGAAGGGCGGGATCAAGGGCTAG
PROTEIN sequence
Length: 465
MVSKSSGFRSEHDSMGKLQVPADALWGAQTQRAVDNFHISGRPMPAAFIRALALVKASAALVNGHLGLLDGKRADAIVEAATAVAGGAHADHFPIDRYQTGSGTSSNMNANEVIAHLAGKASRLAIHPNDHVNLGQSSNDTIPTALRVMAVRETEATLLPQLEHLRNTIDAQAKAIGAVVKTGRTHLMDAMPLTFAQEFGAWEAQLASAQARIEDSLKRVARLPIGGTAIGTGINAHPKFGKAVAKALNAATGLGFSQNPNTFEGLAAQDDLVELSGQLSALAVALMKIGNDLRWMNSGPLAGLGEIELQALQPGSSIMPGKVNPVIPEALCMVCAQIMGLHQANTVAGQSGNFQLNVMLPLLASNLDEAIGLLANGMRELADNAIATLKIRRDVVAQALDRNPILVTALNPVIGYEKAAKIAKRAYAEQRPVLEVALEDSGLAEKQLRKLLEPAALTKGGIKG*