ggKbase home page

scnpilot_solids1_trim150_scaffold_1885_2

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3230..3883)

Top 3 Functional Annotations

Value Algorithm Source
response regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035F6EAE similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 216.0
  • Bit_score: 319
  • Evalue 3.50e-84
Response regulator {ECO:0000313|EMBL:EYR69670.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 216.0
  • Bit_score: 324
  • Evalue 9.00e-86
LuxR/UhpA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 216.0
  • Bit_score: 315
  • Evalue 1.20e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGGGATCAGGGTATTCATCGTTGACGACCACGCGCTGGTGCGCGCCGGCTTCCGCCTGATCCTGGGCGCGGAGGGCGACATCGAGGTGGTCGGAGAAGCCGACAGCGCGGAATCCGCGCTGCCGCAGATCCGCAAGCTCAAGCCGGACGTGGTGCTGTGCGACCTGCACCTGCCTGGCCTCAGCGGGCTGGAACTCACCGAGCGCATCGTCCGTGGCGATTACGGCACGCGCGTCATCGCCGTGTCGGTGCTGGAAGACGGGCCGATGCCACGCCGGCTGCTGGAGGCGGGGGCGTTCGGCTACGTCGGCAAGGCCAGCGACGCGTCCGAGCTGTTGCGCGCGGTGCGCGACGTGGCACGTGGCAGGAAATTCCTGGCCAGCTCGATCGCGCAGGGGCTGGCGCTGGCTGGCCTGCACGGAGAAACCGCCTCGCCGTTCGATACGCTGACGCCGCGCGAACTCGAGGTCGCCCTGCTTCTGAACCAGGGGCTGCGGCAGGAGGCCATCGCGCGCCAGCTCAGCCTGAGCGCGAAGACCGTGAATACCCACAAGACCCGGCTGTTCGAGAAGCTGGGGATCCACGACAACATCGCGCTGGCGCGGCTGGTGGGCCAGTACGGCCTGGTCGATCCTGCGCAGGCGGTGCACTGA
PROTEIN sequence
Length: 218
MGIRVFIVDDHALVRAGFRLILGAEGDIEVVGEADSAESALPQIRKLKPDVVLCDLHLPGLSGLELTERIVRGDYGTRVIAVSVLEDGPMPRRLLEAGAFGYVGKASDASELLRAVRDVARGRKFLASSIAQGLALAGLHGETASPFDTLTPRELEVALLLNQGLRQEAIARQLSLSAKTVNTHKTRLFEKLGIHDNIALARLVGQYGLVDPAQAVH*