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scnpilot_solids1_trim150_scaffold_2458_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 2660..3337

Top 3 Functional Annotations

Value Algorithm Source
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 222.0
  • Bit_score: 362
  • Evalue 5.30e-97
rpe; ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 222.0
  • Bit_score: 354
  • Evalue 2.50e-95
Ribulose-phosphate 3-epimerase n=2 Tax=Xanthomonas campestris RepID=G0CJ48_XANCA similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 222.0
  • Bit_score: 354
  • Evalue 7.80e-95

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAGCACGCAATCCACCGTCATTGCCCCGTCCATCCTGTCCGCCAATTTCGCCAGGCTGGGCGAGGAAGTGGACAACGTGCTGGCCGCCGGCGCCGACTGGGTGCACTTCGACGTGATGGACAACCATTACGTGCCCAACCTGACCATCGGCCCGCTGGTCTGCGAGGCGCTGCGCAAGCACGGCGTGACCGCCCCGATCGACGTGCACCTGATGGTGGAGCCGGTCGACGGCCTGATCCCGATGTTCGCCGACGCCGGTGCCAGCCACATCAGCTTCCACCCCGAGGCCAGCAAGCACGTCCACCGCAGCGTGCAGCTGATCAAGTCGAAGGGCTGCCAGGCCGGGCTGGTGTTCAATCCGGCCAGCTCGCTGGACGTGCTGGACACGATGCTGGACGAGATCGACTACGTGTTGCTGATGTCGGTGAACCCCGGCTTCGGCGGGCAATCGTTCATCCCCTCCGCGCTCAAGCAGCTGCGCAAGGTGCGGGACATGATCGATGCCAGCGGCCGACCGGTCCGCCTCGAGATCGACGGCGGGGTGAAGCCGGACAACATCGGCGAGATCGCGAAAGCCGGCGCCGACACTTTCGTCGCCGGCAGCGCGATCTTCGGCAAGCCGGACTATGCCGCGACGATCGCGGCGATGAAGCAGGCGGTGGTTGCCGCGCGTTGA
PROTEIN sequence
Length: 226
MSTQSTVIAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAPIDVHLMVEPVDGLIPMFADAGASHISFHPEASKHVHRSVQLIKSKGCQAGLVFNPASSLDVLDTMLDEIDYVLLMSVNPGFGGQSFIPSALKQLRKVRDMIDASGRPVRLEIDGGVKPDNIGEIAKAGADTFVAGSAIFGKPDYAATIAAMKQAVVAAR*