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scnpilot_solids1_trim150_scaffold_4167_5

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(4075..4785)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus denitrificans RepID=UPI0003789B46 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 236.0
  • Bit_score: 462
  • Evalue 3.60e-127
  • rbh
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 236.0
  • Bit_score: 443
  • Evalue 3.20e-122
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 236.0
  • Bit_score: 443
  • Evalue 1.40e-121

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCTGAAAAAGCCTCGTCAAAAGACGAACAAGTCACGAAACATGCGCCGCTGGTCAAGCGCATTGCGTATCACATGATGGCGCGTCTGCCCGCCAGCGTGGAAGTCGACGACCTCATCCAGGTCGGGCTGATCGGCTTGATGGACGCGGTGTCGCGCTTCGACGGCACCCAGGGGGCGCAATTCGAGTCCTATGCCACCCAGCGCATCCGCGGCGCCATGCTCGACGAGCTGCGCGAGGCCGACTGGCTGCCGCGCCACGTGCGGCAGAAATCGCGGCAGATCGAAGCCGCCATCCACCGGCTGGAACAGCGCAACGGCAAGGCGCCGTCGGAGCAGGAAATCTCCGCCGAGATGGGCATGCCGATCGATCAGTACCAGTCGATGCTGGGCGACGTGAAATGCTCGCAGCTGCTGTATTACGAGGATTTCTCCGACGAGGACAGCGCCAGTTTCCTGGAACGCTACCTGGTTGACGGCAGCAGCGATCCGCTCGCGGTGCTGGAAGACGAAGGTTTCCGCGACAGCCTGATTGCCGCGATTCATCACCTGCCCGAGCGCGAACGCAGCATGATGGGCATGTATTACGAACAGGACATGAATCTGAAGGAAATCGGCGCGGTGCTCGGCGTCTCCGAATCGCGCGTGTGCCAGCTGCATTCGCAGGCGGTGGCACGCTTGCGCGCCCAGCTCAAGATCTGGAAGGACTGA
PROTEIN sequence
Length: 237
MAEKASSKDEQVTKHAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVSRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIHRLEQRNGKAPSEQEISAEMGMPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSSDPLAVLEDEGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD*