ggKbase home page

scnpilot_solids1_trim150_scaffold_4703_10

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 4468..4731

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 id=1336994 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 173
  • Evalue 9.60e-41
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 87.0
  • Bit_score: 164
  • Evalue 1.40e-38
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 173
  • Evalue 1.40e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGACTGAAATGAAAAAGATGGTGCGCACGCTGACAGGGCGTGTGGTGAGCGACAAGATGAACAAGACGGTCACAGTCCTGGTCGAGCGTCGTGTCAAGCATCCGGTTATCGGCAAGATTATCCGGTTGTCCAAAAAGTATCACGCTCACGATGAAAACAACGAGTTTCACGAAGGCGACACGGTGCAGATCGAAGAGTCACGCAAGCTTTCACGCACCAAGGCGTGGACCGTAAGCAAGCTGATCGAGCGCGCGCGCGTATAA
PROTEIN sequence
Length: 88
MTEMKKMVRTLTGRVVSDKMNKTVTVLVERRVKHPVIGKIIRLSKKYHAHDENNEFHEGDTVQIEESRKLSRTKAWTVSKLIERARV*