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scnpilot_solids1_trim150_scaffold_8525_2

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1221..2936)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C71D3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 571.0
  • Bit_score: 1104
  • Evalue 0.0
  • rbh
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 571.0
  • Bit_score: 1049
  • Evalue 0.0
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 571.0
  • Bit_score: 1049
  • Evalue 0.0
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGGCCGCTGTGACAAACACCAACAATTTAACCGGGCTGGCGCGTGCCATGGTCAATCATGGCTGGCTGTCCGAGGACGACGCCGAGGGCGTGTGGAAACGCGCCAGCCAGTCCGGCGAATCGTTCGTGACCGAACTCATCAAGGGACGGCGCTTCAAGGCCGATCAGGTAGCCGAATTTGCCGCCGGTTCATTTGGCTATCCTTACCTGGATTTGAATGCCATGGATGCCGACGGCCTGCCGCAGGGGCTGCTCGATCCCAAGCTGGTGCAGAAACGGCGCGTGGTCGCGCTGTATCAGCGCGGCAACAAACTGTATGTGGCAACGTCCGATCCCACCCATCTGCAGGCGCTGGACGAGGTGAAGTTCCAGACCGGGCAGGCGGTGGAGCCGGTGGTGGTGGAAGACGACAAGCTCGGCAAGCTGATCGAGAAGGCGGGCGAAGCGGCCGACAGCACGCTGGCTGTGCTGAATGCGGAAGACCTCAATCTCGACTTTGCCGACGAGGAAAGCGCTGCCGCCCAGCAGGACACCGGCGGCATCGAAATCGACGACGCGCCGGTGGTGCGCTACCTGCAGAAAATCATGCTCGATGCGATCAATCTGGGCGCATCCGACATCCATTTCGAGCCTTACGAAAAGTATTACCGCATCCGCTACCGGCGTGACGGCGTGCTGTCCGAGGTGGCGCAGCCGCCGATGGCGATCAAGGACAAGGTGGCATCGCGCATCAAGGTGCTGTCGCGGCTGGATATTTCGGAGAAACGCGTGCCGCAGGACGGCCGCATGAAAATGGTGCTGTCGAAAAATCGTGCCATCGATTTCCGGGTCAGTACCCTGCCGACGCTGTATGGCGAAAAAATCGTCATGCGTATTCTCGACCCCACCAGCGCCCAGCTGGGCGTGGATGCGCTGGGCTACGAGCCGTGGCAGAAAGAAATCCTGCTGGATGCGGTGCAGCGCCCTTACGGCATGGTACTGGTGACCGGGCCGACCGGTTCCGGCAAGACGGTGTCGCTCTACACCTGCCTGAACATTCTCAACAAGCCCGACGTCAACATCTCGACCGCGGAAGATCCGGCGGAAATCCAGTTGCCCGGCATCAACCAGGTCAACGTCAACGACAAGGCCGGACTGACTTTCTCGGCCGCACTGAAATCCTTCCTGCGGCAGGATCCCGACGTCATCATGGTCGGCGAGATCCGCGATCTGGAAACTGCCGATATTGCCATCAAGGCTGCGCAAACCGGCCACATGGTGATGTCCACGCTGCACACCAACGATGCTCCCGGCACGCTGACCCGTTTGCTGAACATGGGGGTGGCGCCGTTCAACGTCGCCTCCTCGGTGATCCTGATCACCGCCCAGCGGCTGGCGCGGCGCTTGTGCGCGTGCAAGCAACCCGTCGATATTCCGCAGGAAGCCCTGCTGGCGGCCGGCTTCACCGAAGCGCAGCTGGATGGCAACTGGAAACCCTACAAACCGGTCGGTTGCGATATCTGCGGCGGTACCGGCTACAAGGGGCGGCTGGGCATCTATCAGGTGATGCCGATCACCGACGCCATGACCCGCATCATTCTCAAGGGCGGGGACGAAACCGACATTGCCGACCAGGCCCGGCGCGAAGGCGTGCTTGACCTGCGCCAGGCCGGGTTGTTGAAAGTGAAAGCCGGCCTCACCTCGCTGGAAGAGGTCGAGGCCGTCACCAATATCTAA
PROTEIN sequence
Length: 572
MAAVTNTNNLTGLARAMVNHGWLSEDDAEGVWKRASQSGESFVTELIKGRRFKADQVAEFAAGSFGYPYLDLNAMDADGLPQGLLDPKLVQKRRVVALYQRGNKLYVATSDPTHLQALDEVKFQTGQAVEPVVVEDDKLGKLIEKAGEAADSTLAVLNAEDLNLDFADEESAAAQQDTGGIEIDDAPVVRYLQKIMLDAINLGASDIHFEPYEKYYRIRYRRDGVLSEVAQPPMAIKDKVASRIKVLSRLDISEKRVPQDGRMKMVLSKNRAIDFRVSTLPTLYGEKIVMRILDPTSAQLGVDALGYEPWQKEILLDAVQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPDVNISTAEDPAEIQLPGINQVNVNDKAGLTFSAALKSFLRQDPDVIMVGEIRDLETADIAIKAAQTGHMVMSTLHTNDAPGTLTRLLNMGVAPFNVASSVILITAQRLARRLCACKQPVDIPQEALLAAGFTEAQLDGNWKPYKPVGCDICGGTGYKGRLGIYQVMPITDAMTRIILKGGDETDIADQARREGVLDLRQAGLLKVKAGLTSLEEVEAVTNI*