ggKbase home page

scnpilot_solids1_trim150_scaffold_13117_2

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1122..2378)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 418.0
  • Bit_score: 747
  • Evalue 3.20e-213
  • rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380DEAC similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 418.0
  • Bit_score: 805
  • Evalue 2.40e-230
  • rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:AAZ98525.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 418.0
  • Bit_score: 747
  • Evalue 1.40e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
CTCATCGAAGGCTACGACGCCAAACAAGCCGGCATCAAGGCCGACATCTTTGTCGTCGGCAACGTCGTCACCCGCGGCAACCCGCTGATGGAGGCCATTCTCGAACGCAACCTCGCCTACACCTCCGGCCCGCAATGGCTGGCCGACAACGTCCTGCACGACAAATGGGTGCTCGCGGTGGCGGGCACCCACGGCAAGACCACCACCGCCGCGATGCTGGCGTGGATCCTCGACGACGCGCGCATGCGCCCGGGCTTTCTGATCGGCGGCATTCCACAGAATTTCGGCATATCCGCGCGGCTCACCGACAGCCCCTTCTTCGTCATCGAGGCCGACGAATACGACACCGCCTTCTTCGACAAGCGCTCCAAGTTCATCCACTACCGCCCGCGCAGCGTCATCCTCAACAACCTCGAATACGACCACGCCGACATCTTCCCCGATCTCGCCGCCATCGAAACCCAATTCCACCATCTGGTGCGCACCGTGCCCGGCAACGGACTCGTCGTCGCCAACGGCCGCGAAGCCAGCCTCGAGCGCGTGTTCGAGCGCGGCCTGTGGACTCCGGTGGAACGCTTCGGCAGCAGCGGCGGCTGGACCGCCGGCGAGGCCGACGCCCAGGGCAGCTTCGACGTATTCTTCAACAGCGTCCGGCAGGGCCGGGTGAACTGGGAGCTGCTGGGCGAGCACAACCGCATGAACGCGCTCGCCGCCATCGCCGCCGCGCGCCATGCCGGCGTTCCCGCCGCCGCCGCGATCGACGCCTTGAGCCGCTTCGAGAACGTCAAGCGCCGCATGGAAATCCGCGGCGCGGTCCACGGCATCACCGTCTACGACGATTTCGCCCACCATCCCACCGCCATCGTCACCACCATCGAAGGCCTGCGCCGCAAGGTCGGCCGCGCACGCATCCTCGCCGTGCTGGAGCCGCGCTCCAACACCATGAAACTCGGCGTGATGAAAGCGCAACTGCCCGCCAGCCTCAGCGACGCCGACCAGGTCTATTGCTACGGCGCCACCCTCGGCTGGGACGCCGCCGAAGTGCTGACCCCGCTGGGGGCCAAGGCGCGCGTGTTCGACAACCTCGACAAACTCGTCAGCCAACTGCTGGAGGACACCCGTCCCGGCGACCACGTGCTGATGATGAGCAACGGTGGCTTCGGCGGCATCCACGCCAAGCTGCTGGACACGCTGCGCCAGCACTATCACGAGGACATCGTGCTGACGCCGATGCATCGCTACGGGGGCTATGCGTAA
PROTEIN sequence
Length: 419
LIEGYDAKQAGIKADIFVVGNVVTRGNPLMEAILERNLAYTSGPQWLADNVLHDKWVLAVAGTHGKTTTAAMLAWILDDARMRPGFLIGGIPQNFGISARLTDSPFFVIEADEYDTAFFDKRSKFIHYRPRSVILNNLEYDHADIFPDLAAIETQFHHLVRTVPGNGLVVANGREASLERVFERGLWTPVERFGSSGGWTAGEADAQGSFDVFFNSVRQGRVNWELLGEHNRMNALAAIAAARHAGVPAAAAIDALSRFENVKRRMEIRGAVHGITVYDDFAHHPTAIVTTIEGLRRKVGRARILAVLEPRSNTMKLGVMKAQLPASLSDADQVYCYGATLGWDAAEVLTPLGAKARVFDNLDKLVSQLLEDTRPGDHVLMMSNGGFGGIHAKLLDTLRQHYHEDIVLTPMHRYGGYA*