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scnpilot_solids1_trim150_scaffold_20576_1

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..893)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4213 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 297.0
  • Bit_score: 564
  • Evalue 6.50e-158
  • rbh
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 300.0
  • Bit_score: 545
  • Evalue 9.90e-153
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 300.0
  • Bit_score: 545
  • Evalue 4.40e-152

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAGCCGTGAATCCAGTGACGAATCCGAAGATCTGACGCCAGACGATGCCGAAGCGGGGCAGCCGGCGGTGGACAGCAGCGAGGAGCTGGCGTCGGCCATCCTCGACGAGCCGCAGGTCGACGTCACCCAGCTCTATCTCAACGAAATCGGCCAGGCGCCGCTGCTGACCGCGGCGGAGGAAGTCGCGCTGGCGCGGCGCACCGTGCTGGGCGACTTCGAAGCGCGCCAGACCATGATCGAGCGCAACCTGCGGCTGGTGGTCAACATCGCCAAGCATTACGCCAACCGCGGCCTGACGCTGCTCGACCTGGTGGAAGAAGGCAATCTTGGGCTGATCCATGCGCTGGAAAAATTCGACCCCGAGCGTGGTTTCCGCTTCTCGACCTATGCCACCTGGTGGATCCGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATCCGCCTGCCGGTGCACGTCATCAAGGAACTCAACATCTATCTGCGCGCCAAGCGGCATCTGGAAACCCACGGCGTGACCGATGCCAGCTCGGACGATATCGCCGCGCTGACCGGCCATCCGGTCGAAGACGTGCGCCGCATCATGCGGCTGAATGAAAGAGTGGCATCGCTCGATGCGCCGCTCGAGGTCGACCCCACGCTGTCGCTGGGCGAAACGATCGCCGACGACAATGTCCATCTGCCGGACGAAATGCTGCAGGTCGAGGAAATCGAACACCATGTCCGCGAATGGCTGACTCAGCTCAACGACAAGCAGCGCTGGGTGATCGAGCGGCGCTTCGGCCTGAACGGCTGCGAAGCCTGCACGCTGGAAGACCTGGCGCTCGAACTGCAGGTGACGCGCGAGCGTGTGCGCCAGATCCAGATGGAATCCCTGCGCGTG
PROTEIN sequence
Length: 297
MSRESSDESEDLTPDDAEAGQPAVDSSEELASAILDEPQVDVTQLYLNEIGQAPLLTAAEEVALARRTVLGDFEARQTMIERNLRLVVNIAKHYANRGLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHVIKELNIYLRAKRHLETHGVTDASSDDIAALTGHPVEDVRRIMRLNERVASLDAPLEVDPTLSLGETIADDNVHLPDEMLQVEEIEHHVREWLTQLNDKQRWVIERRFGLNGCEACTLEDLALELQVTRERVRQIQMESLRV