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scnpilot_solids1_trim150_scaffold_472_19

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(19284..20036)

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 231.0
  • Bit_score: 416
  • Evalue 4.50e-114
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W783_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 250.0
  • Bit_score: 502
  • Evalue 3.40e-139
  • rbh
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIL95324.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 250.0
  • Bit_score: 502
  • Evalue 4.70e-139

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGATCGAGATCCTGTACCAGGACGACGCACTGATCGCGGTCAACAAGCCCGCGAACCTTGCCGTGCATCGCTCGAAGATGGTGGGCAATGCCGAGGAATTCCTGATCGACCTGCTGCGCGAACAGATCGGCGACAACGTCTACCTGGCGCACCGGCTCGACCGCGCCACCAGTGGCGTGCTGCTGGTGGCGCGCAGCAAGGAGGTCGCTGCCGCGCTGGGCGAACAGTTCATGGCCCGCAGCATCCACAAGCAGTACCTGGTGGTGGTACGCGGCTGGCCCGAACCGGTCGAGGACGTGATCGACTATCCGCTGCCCGGCTCGCGCGAAACCGGCCCGCGCCGCGAGGCACGCACCCGCTACCGGCGCCTCGCCACCATCGAGGTGCCGATCGAACTGGGCCGCTATCCACAGCAGCGCTACGCGCTGGTTCTCGCCGAACCCGAAAGCGGCCGCTTCCGCCAGATCCGCAAGCACCTGGCGCATGTCCATCACCCGGTGATCGGCGATTGCCAGCACGGTCGCGGCGACCACAACCGCCTGTACAAGCAGCACTTCGGCTGTCATCGGATGTTGCTGCATGCATGGCGGCTGGATTTCCACCACCCGGTCACCGGTGCGCCGATGCAGCTGGAAGCTCCGCTGGATCAGGCCTACACGCACCTGCTCGCCCGGTTCGGCTGGCCCCGGCCCGAACACATCGTGGCGTCGCCGAACGATCCCCCGCCACCCCCCGGTTCGTCCCGGGCGTAG
PROTEIN sequence
Length: 251
MIEILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQIGDNVYLAHRLDRATSGVLLVARSKEVAAALGEQFMARSIHKQYLVVVRGWPEPVEDVIDYPLPGSRETGPRREARTRYRRLATIEVPIELGRYPQQRYALVLAEPESGRFRQIRKHLAHVHHPVIGDCQHGRGDHNRLYKQHFGCHRMLLHAWRLDFHHPVTGAPMQLEAPLDQAYTHLLARFGWPRPEHIVASPNDPPPPPGSSRA*