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scnpilot_solids1_trim150_scaffold_599_11

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(7822..7941)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 84
  • Evalue 3.50e-14
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 84
  • Evalue 4.90e-14
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 39.0
  • Bit_score: 74
  • Evalue 6.70e-12

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 120
ATGACGCTCGGCATCCACGCGGTGTATCCGTCGCGCAAGCACCTGCCGATCAAGACGCGCAGGCTGGTGGATTTTCTGGTGGAGGCGTTTGCGGTGCCGGGGTGGGATGTGGCGCGGTGA
PROTEIN sequence
Length: 40
MTLGIHAVYPSRKHLPIKTRRLVDFLVEAFAVPGWDVAR*