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scnpilot_solids1_trim150_scaffold_532_14

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: 17725..19713

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 662.0
  • Bit_score: 1313
  • Evalue 0.0
  • rbh
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EIL93071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 662.0
  • Bit_score: 1313
  • Evalue 0.0
Rhs-family protein similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 659.0
  • Bit_score: 630
  • Evalue 5.20e-178
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1989
ATGACGAATCGGATGACACTGAAGTCAGACCTCGGTGACAAGCTGCTGCCTGCCAGCCTGTCTGGCGGCGAGCAGCTGGGGAGGCTGTTTTCCTACCAGTTGAAGCTGATCAGCACGGACAGCGAAGTCAAACTGCTGCCTCTGCTCGGCAGCTCGATGACGGTCACCTTCGAATCTGAGGGTTACAAGCGCTATTTCAGCGGTATGGTCTCGGAAATCTCGCAGACCGGGTTCGAAAGCTTCAAGGAAGAGCGTTTTGCCGAGTATGCGGTGACGCTGGTGCCGAAGGCCTGGCTGCTGATGCACAAGGTCGATTGCCGCATCTACCTCAAGCAATCGGTGCCCGACATCGTCAAGGCGGTGCTGGCCGAGTTCGGCTATGGCGACGTCAAGCTGAGCCTCAGCGGCAACTATCCGCCCCGCGACTATTGCGTGCAGTACCGCGAGGACTACTTCAACTTCATCAGCCGGCTGATGGAACAGGAAGGCATCTACTACTTCTTTCAGCACACCGATGGCGTGCACACCATGGTGCTCGCCGACTCCCTGGGTGCACATGCCACCACCAGCGGGTACGCACAGCTTCCGTATCGGCCGCAGGCCGGGGCAAGCCGCGCGGCGCTGGAGGTCTCGATCACCGACTTTTCATCGGCGCGATCGGTGCAGACGACCAAGTACTCACTGACCGATTACGACCCGATGAAGCCGAAGACTTCGTTGCTTGGGGAGGAGACGATCAGCAACGCCGACGACAACCACTCCGTCAACGGACTGGAGTCGTTCGACTTCCCCGGCGATCACGAGACCAGCGACGCGGGCAAGCACTACGCCCAGGTGCGTCTCGAAGCGATCAACGTGGCCCAGTCGCTGTGCTCGGGCTCGACCAACGCGCCGGGACTTCTGACTGGCGCACTGTTCAAGCTGACCAAGTTCCCCCGTGCCGAACTGAACCAGGAATACCTGGTCACCGGGTCGACCGTGCACATCGAGAACGCCGCGCGCACGTCCGGCGGCTCGGATGGCGAGTTGTTCTTCTGCAATTTCTCGGTGATCAGCAGCCGCCAGCCGTTCCGCACCATGCAGACGGCGATCAAGCCGATGGTCGTCGGCCTGCAGACTGCCGTGGTGTCGGGAAGCGACAAGGCCGAAGACATCTCGGTGGACAAGTACGGCCGCATCCAGGTGACGTTCCACTGGAACAAGTCGGACAAGAAGAACGCCCACATTTCCTGCCCGGTCAGGGTGGCGTCGTCGTGGGCCGGCAAGAACTGGGGCGCCGTGCACATTCCCCGGGTCGGGCAGGAAGTGGTGGTCAGCTTCCTCGAAGGCGACCCGGATCGCCCGCTGGTGATCGGCAGCGTCTACAACGCCGACAACCTGCCGCCTTACGCGCTGCCCGACAACAAGACCCAGAGCGGCGTGAAGAGCCGCAGCCATGAAGGCGGTGGCGCGGACGACTTCAACGAAATCCGCTTCGAGGACAAGAAGGGCAGCGAGGAGCTGTTCCTGCACGCGCAGAAGGACATGCGCGAGGAAGTGGAGAACGATCATTTCGTGCAGATCGACCACGACGAGAAGATCACCATCAAGAACGACCAGACCGAGGACATCACCGGCAATCGCACGGCGACGGTGGGCAAGGACGACAAGCTGGACGTCAAGCAGAACGGCACCACCACGATCGGCCAGAAGTTCAAGCTCGATGCGGGCACGGAGATCGAGCTGGTCACGGGTGCTTCGAGCATCGTCATGAAGAGCGACGGCTCGATCACGATCAAGGGCGTCAACATCACGCTCGACGGCAGCATGAAGATCGCTGCCAAAGCTGGCGTCAACATGGATCTCGGTGCAGGCGTGTCGCTGAAGGCCCATTCCGACGCGCAGGTCGAAGTGGCCGGCGGCGCCATGACGACGGTCAAGGGCCCGATGCTGATGCTCAAGGCCGACGCGATGGCGCAGATGTCCGGCGGCATCATCATGATTGGCTAG
PROTEIN sequence
Length: 663
MTNRMTLKSDLGDKLLPASLSGGEQLGRLFSYQLKLISTDSEVKLLPLLGSSMTVTFESEGYKRYFSGMVSEISQTGFESFKEERFAEYAVTLVPKAWLLMHKVDCRIYLKQSVPDIVKAVLAEFGYGDVKLSLSGNYPPRDYCVQYREDYFNFISRLMEQEGIYYFFQHTDGVHTMVLADSLGAHATTSGYAQLPYRPQAGASRAALEVSITDFSSARSVQTTKYSLTDYDPMKPKTSLLGEETISNADDNHSVNGLESFDFPGDHETSDAGKHYAQVRLEAINVAQSLCSGSTNAPGLLTGALFKLTKFPRAELNQEYLVTGSTVHIENAARTSGGSDGELFFCNFSVISSRQPFRTMQTAIKPMVVGLQTAVVSGSDKAEDISVDKYGRIQVTFHWNKSDKKNAHISCPVRVASSWAGKNWGAVHIPRVGQEVVVSFLEGDPDRPLVIGSVYNADNLPPYALPDNKTQSGVKSRSHEGGGADDFNEIRFEDKKGSEELFLHAQKDMREEVENDHFVQIDHDEKITIKNDQTEDITGNRTATVGKDDKLDVKQNGTTTIGQKFKLDAGTEIELVTGASSIVMKSDGSITIKGVNITLDGSMKIAAKAGVNMDLGAGVSLKAHSDAQVEVAGGAMTTVKGPMLMLKADAMAQMSGGIIMIG*