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scnpilot_solids1_trim150_scaffold_1987_4

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(1608..2066)

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6U1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 152.0
  • Bit_score: 312
  • Evalue 1.80e-82
  • rbh
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 152.0
  • Bit_score: 312
  • Evalue 2.50e-82
small protein A (tmRNA-binding) similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 156.0
  • Bit_score: 282
  • Evalue 1.10e-73

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGCAAAAGCTGATTACCCTGCTGGTTTTCACCATGCTGGCGCTCTCTCTCGCCGGCTGCCACATCGTCTACAAGCCCGACGTACAGCAAGGCAATCTGCTGGACAAGAAAACGGTGGATCAGCTCAAGCCCGGAATGACCAAGCATCAGGTGCTGGTGCTGATGGGAACGCCCTCGGTGAACAGCCCATTCGATCAGAGCCGCTGGGACTACGTTTCGACTTTTTCGCATCGTGGCGCCCCGATGAAGGTGCGCACGTTCACGCTGACCTTCAACAACGACATCCTGGTGCGTACCGAAGGTGACTTCTTTGCGCAGGATGCCCAGCAACTGGTCAAGGACAGCAAGAAGTACAACGCCGGCTATCCGGCCAACGAAACCGAAGGCGACAAGAACACCTCGCCGGATGCCAAGAAGGACAACGGCGGTTTCGGACAGGGCAGCAACGACGGCCACTGA
PROTEIN sequence
Length: 153
MQKLITLLVFTMLALSLAGCHIVYKPDVQQGNLLDKKTVDQLKPGMTKHQVLVLMGTPSVNSPFDQSRWDYVSTFSHRGAPMKVRTFTLTFNNDILVRTEGDFFAQDAQQLVKDSKKYNAGYPANETEGDKNTSPDAKKDNGGFGQGSNDGH*