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scnpilot_solids1_trim150_scaffold_2792_4

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(5063..5965)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 300.0
  • Bit_score: 452
  • Evalue 2.80e-124
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94642.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 300.0
  • Bit_score: 452
  • Evalue 3.90e-124
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 297.0
  • Bit_score: 292
  • Evalue 1.50e-76

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGCCTGCGCCAGATCGAGCTTTTCCACGCGGTGCTGACCACCGGCAGCCTTACCGGCGCCGCAGAGCTACTGAACATCTCTCAACCGGCAGCCAGCAAGGCTCTGCAGCATGCGGAGCAGCAGCTGGGCTTCGCCTTGTTCAGCCGCGTACGCGGACGCCTGCAGCCGACCCCGGAGGCACTGCTGCTGCGCCATCGCGTGGAAAACATCGCGCAGGAACTGCACGACCTGCAGCGCCTGACGGCAAACATCGCCCGCCCGGGCAGTTCGCCGTTGCGCGTGACCTGCACACCCACCGTGGCGCAGACCATGCTGCCGGACGCGATCATGCTGCTGCGCAAGGCCTTTCCGGATGCCACCGCCGAACTGTCCACACAGCACTCGGCCGTCATGTACGAGTCCATTCTGCTGCACGAGGTCGACATCGGCTTCACGATGCAGGATTTCGGCCATTCGGCAGTCCGGCGCGAGCCTCTGTGCAACGGACAAGTCATGGTCATCGCACCGCCGGGCTGGTGGTCGGATGGCGAGCTGGCCGAACCGCTGCCGCTCAGCGCACTCGCCGGACAACCGATGATCGGCATCGCCATCCACGATGCCTTCGGCGGCATGCTGCACAGCCAGCTCGCCCATGTGACGCCCGCCCCGCAGACGGCAGTGTGGGTGCAGACCTACCAGCTCGCCTACGCCCTGGTCGCCCGCGGCCAGGGGCTCGCCCTGGTCGATCCGTTTACCGCATCGTGCGACCAGCGCCAAACCGTGCAAACGCGCCCACTCAAGCTGGAGCTGGATGTCATGCTTTATGCGGTCTTCCGGCTGGACAGTCCACTGAATCCGGTGCAGCAGCGCTTTCTCGACATCATGCGCGAGCTTGCCACGCGGATGCTTGGCCGGGCTTGA
PROTEIN sequence
Length: 301
MRLRQIELFHAVLTTGSLTGAAELLNISQPAASKALQHAEQQLGFALFSRVRGRLQPTPEALLLRHRVENIAQELHDLQRLTANIARPGSSPLRVTCTPTVAQTMLPDAIMLLRKAFPDATAELSTQHSAVMYESILLHEVDIGFTMQDFGHSAVRREPLCNGQVMVIAPPGWWSDGELAEPLPLSALAGQPMIGIAIHDAFGGMLHSQLAHVTPAPQTAVWVQTYQLAYALVARGQGLALVDPFTASCDQRQTVQTRPLKLELDVMLYAVFRLDSPLNPVQQRFLDIMRELATRMLGRA*