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scnpilot_solids1_trim150_scaffold_934_8

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(6329..6883)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W703_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 184.0
  • Bit_score: 357
  • Evalue 7.60e-96
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:EIL95244.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 184.0
  • Bit_score: 357
  • Evalue 1.10e-95
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 183.0
  • Bit_score: 232
  • Evalue 1.50e-58

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGATGCCGCGGTCGATCCCGATGCCCTGCTGATGCTGGCCTACGCCCGTGGCGATCTTGCCGCGTTCGAGGCGCTGTATGCGCGCCACCGCGGCATGCTGTACCGCTTCCTGCTGCGCAGCGTGCGCGATCCGCATCGCACCGACGAGCTGTTCCAGGAAACCTGGAGCCGGGTGATCGGCGCCCGCGAACGCTACCAGCCACAGGCGAAGTTCAGCACCTGGCTGCTGCAGATCGCCCACAACCTGATGATCGACGGCACCCGCCGCCAGCGCCCGATGGCCGATGGCGACGAAGCCGAGCTGGCACTGGCCAACCTGGCCACGCCCGAACGCGAGCAGCCCGACCACGCGCTGTCCGCCTTCGAACGCCGACGCAACCTGCAGCTGGCGATCGAGCAGTTGCCGGACGAACAGCGCACCGCCGTGCTGCTGCGGCTGGAGCAGGAGCTGAGCCTGGAGGAAATTGCCGTGGTCACCGGTGCCGGGCGCGAAACGGTGAAGTCGCGCCTGCGCTATGCCATGAATCGATTACGCGAAGTGCTGTCCGAATGA
PROTEIN sequence
Length: 185
MDAAVDPDALLMLAYARGDLAAFEALYARHRGMLYRFLLRSVRDPHRTDELFQETWSRVIGARERYQPQAKFSTWLLQIAHNLMIDGTRRQRPMADGDEAELALANLATPEREQPDHALSAFERRRNLQLAIEQLPDEQRTAVLLRLEQELSLEEIAVVTGAGRETVKSRLRYAMNRLREVLSE*