ggKbase home page

scnpilot_solids1_trim150_scaffold_934_28

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: 29191..30450

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 416.0
  • Bit_score: 800
  • Evalue 8.20e-229
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 419.0
  • Bit_score: 752
  • Evalue 5.80e-215
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W726_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 416.0
  • Bit_score: 800
  • Evalue 5.90e-229
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGTGAGATGGCTGTACAGAAAGCGCGCCCGGCCGAGCCGGCGCAACGGCGGCCCAGCGTGGCCGTGCATGTGGGCAAGGTGAAGGTGGGCGGCGGTGCGCCGATCGTGGTGCAGTCGATGACCAACACCGACACCGAAGATCCGGCCAGCACCGCGAAACAGATCGCCGAGCTCGCCCGCGCCGGCTCCGAGATGGTGCGCATCACGGTCAATACCCCGGCCGCGGCCGCCGCGGTGCCGCGCATCGCCGAGCGGCTGGCGATGATGGGCGTGGACGTGCCGATCGTGGGCGACTTCCACTACAACGGCCACCTGCTGCTGGAGCGCGAGCCGGCCTGCGCCGAGGCGCTGGCCAAGTACCGGATCAATCCCGGCAACGTGGGTTTCGGAAAAAAGCACGAAAGCCAGTTCGCCTCGATCATCGAAAAGGCGTTGCGCTACGACAAGCCGGTGCGCATCGGCGCCAACTGGGGCTCGCTGGACCAGGGCATGGTCGCCGCGCTGATGGACGAGAATGCGCAGCGTGCCGACCCGTGGGACGCCTCGCACGTGGCGCGCGAGGCGCTGATCCGTTCGGCGCTGGACTCGGCGGCGCTGGCCGAGAAGCTCGGCCTGGCGCGCGACCGCATCATCCTGTCGTGCAAGGTCTCCGGCGTGCAGGAGCTGATCGCGGTGTATCGCGATCTGGCGATCCGCTGCGATTACGCGCTGCATCTTGGCCTCACCGAGGCCGGCATGGGTTCCAAGGGCATCACTGCCTCGGCCGCGGCGCTGGCCGTGCTGCTGCAGGAAGGCATCGGCGACACCATCCGCATCTCGCTCACGCCCGAACCCGGCGCCTCGCGCACCGGTGAGGTGATCGTGGCGCAGGAGCTGCTGCAGACCATGGGCCTGCGCTCGTTCACCCCGCTGGTCACCGCCTGCCCGGGTTGCGGGCGCACCACCAGCGAGTTCTTCCAGGAGCTGGCCAAGACCGTGCAGGAACACGTGCGCGAGCAGATGCCGCTGTGGCGGGTGCAGTACGACGGCGTGGAAAACCTCACCCTGGCGGTGATGGGCTGCATCGTCAACGGCCCGGGCGAATCCAAGCACGCCAACATCGGCATCTCGCTGCCCGGCAACGGCGAGGCGCCGGCGGCGCCGGTGTTCATCGACGGCGAGAAGGCGATGACCTTGCGTGGCGACAACATCGCCAACGAATTCGTGGGCATCCTCGACGACTACGTGGCGCGCAAGTACACCGCCCGGGCCGGTTGA
PROTEIN sequence
Length: 420
MSEMAVQKARPAEPAQRRPSVAVHVGKVKVGGGAPIVVQSMTNTDTEDPASTAKQIAELARAGSEMVRITVNTPAAAAAVPRIAERLAMMGVDVPIVGDFHYNGHLLLEREPACAEALAKYRINPGNVGFGKKHESQFASIIEKALRYDKPVRIGANWGSLDQGMVAALMDENAQRADPWDASHVAREALIRSALDSAALAEKLGLARDRIILSCKVSGVQELIAVYRDLAIRCDYALHLGLTEAGMGSKGITASAAALAVLLQEGIGDTIRISLTPEPGASRTGEVIVAQELLQTMGLRSFTPLVTACPGCGRTTSEFFQELAKTVQEHVREQMPLWRVQYDGVENLTLAVMGCIVNGPGESKHANIGISLPGNGEAPAAPVFIDGEKAMTLRGDNIANEFVGILDDYVARKYTARAG*