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scnpilot_solids1_trim150_scaffold_37250_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: 2..1126

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 375.0
  • Bit_score: 732
  • Evalue 4.20e-208
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 375.0
  • Bit_score: 701
  • Evalue 1.00e-199
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VS91_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 375.0
  • Bit_score: 732
  • Evalue 3.00e-208

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
GCCATCACCGGCACCAACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTGGACTACTCCGGTCGCTCGGTGATCGTGGTCGGTCCGACCCTGCGCCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTTGAGCTGTTCAAGCCGTTCATCTTCGCCAAGCTGCAGGCGCGTGGCGAAGCCACCACCATCAAGGCGGCCAAGAAGCTGGTGGAGCGCGAGGAAGCGCAGGTCTGGGACATCCTCGAAGAGGTGATCCGCGAACATCCGGTCATGCTGAACCGCGCGCCGACCCTGCATCGCCTCGGCATCCAGGCGTTCGAGCCGAAGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGTACCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTCCATGTGCCGCTGTCGATCGAGGCGCAGCTGGAAGCGCGCACCTTGATGATGTCGACCAACAACATCCTGTCGCCGGCCAACGGCGAGCCGATCATCGTGCCGACGCAGGACGTGGTGCTGGGTCTGTATTACCTGACCCGCGAGCTCATCAACGCCAAGGGCACCGGCATGGTGTTCTCCGGCATCGGTGAGGCACGTCGTGCGTACGACAACCGCGCAGTGGAATTGCACGCCAAGGTCAAGGTGCGCATGAAGCTGGTGCACATCGCCGAAGACGGCACCCGCACGCAGCAGACCCGGATCGTCGACACGACGGTGGGTCGTGCCCTGCTGGCCGAAATCATGCCCGAGGGTCTGCCGTTCGAGCTGGCCAACACCGAGCTGACCAAGAAGAACATCTCGCGCCTGATCAACTCCAGCTACCGTCTGCTGGGCCTGAAGGACACGGTCGTGTTCGCCGATCAGCTGATGTACGCCGGCTATCGCTACGCGACCCGGTCGGGCATCTCGATCGGCATCGACGACATGCTGATCCCGGACGAGAAGAAGCCGATCCTGGAAGAAGCCGAGAAGGAAGTCGTCGAGATCCAGCAGCAGTACCAGTCGGGTCTGGTCACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACC
PROTEIN sequence
Length: 375
AITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEAQVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEARTLMMSTNNILSPANGEPIIVPTQDVVLGLYYLTRELINAKGTGMVFSGIGEARRAYDNRAVELHAKVKVRMKLVHIAEDGTRTQQTRIVDTTVGRALLAEIMPEGLPFELANTELTKKNISRLINSSYRLLGLKDTVVFADQLMYAGYRYATRSGISIGIDDMLIPDEKKPILEEAEKEVVEIQQQYQSGLVTAGERYNKVVDIWSRT