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scnpilot_solids1_trim150_scaffold_14139_3

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1483..2055)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV67_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 190.0
  • Bit_score: 364
  • Evalue 8.30e-98
  • rbh
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF96496.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 190.0
  • Bit_score: 364
  • Evalue 1.20e-97
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 190.0
  • Bit_score: 292
  • Evalue 9.70e-77

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGCGACGAGGCTGAAGGCGCGCTTGAGCATGATCGGCTGATCGAGGCGGTGGCCCTTCGCCGCGATCGCGAAGCCTTCGCCCGCTTGTTCGAACATTTCGCCCCGCGCCTGAAGGCCTGGCTGATGAAGTCGGGCGCGACGGCCGCCGCGGCCGAGGACTTCGCCCAGGACGCCATGCTGACCGTCTGGCGCAAGGCGGACCTGTTCGACGCCCGCAAGGCGCGGGCCGCGACCTGGATATTCACCATCGCTCGCAATCGCCGCCTGGACATGCTGCGACGCGACGCCCGCGCCCTGCCCACGCCCGAGATCGAACCGACCGAGGACGAGGCGATGCGGCCCGACGCCATCCTGGCCATGGCGGACGACGCCCGGCGGGTGCGCGAAGCCCTGTCCCGGCTGAAGCCCGATCAGATCGAAGTCCTGCGCCTGGCCTTCTTCATGGACAGCCCCCATTCCGAAATCGCCCAGCGGCTCGACCTGCCGCTGGGCACGGTCAAATCCCGTATCCGCAACGCCATGATCAAGCTGCGCACGATCCTTGAACCGTCAGAGGAGGCGTCGCGATGA
PROTEIN sequence
Length: 191
MSDEAEGALEHDRLIEAVALRRDREAFARLFEHFAPRLKAWLMKSGATAAAAEDFAQDAMLTVWRKADLFDARKARAATWIFTIARNRRLDMLRRDARALPTPEIEPTEDEAMRPDAILAMADDARRVREALSRLKPDQIEVLRLAFFMDSPHSEIAQRLDLPLGTVKSRIRNAMIKLRTILEPSEEASR*