ggKbase home page

scnpilot_solids1_trim150_scaffold_16431_4

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1748..2020)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 187
  • Evalue 9.30e-45
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 83.0
  • Bit_score: 137
  • Evalue 2.50e-30
Diaminopimelate decarboxylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXN8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 187
  • Evalue 6.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTCGAGGGCGCCGCCCTGCCCTACGATGTCGTCGGCCCCGTCTGCGAGACCGGCGACACCTTCGCGCGCGATCGCGACCTGCCGCCGCTGAAGGCGGGCGACCTCGTCGTCTTCATGAGCGCCGGCGCCTATGGCGCGGTGATGAGCGGCGAATACAACACCCGCCCCCTGGCCGCCGAGGTTCTGGTCGACGGCGAACGCTACGCCGTCATCCGTCCGCGCCCGACCTATGAGCAAATGTTCGCCCGCGAGCCGATGGCCGACTGGCTTTAA
PROTEIN sequence
Length: 91
VEGAALPYDVVGPVCETGDTFARDRDLPPLKAGDLVVFMSAGAYGAVMSGEYNTRPLAAEVLVDGERYAVIRPRPTYEQMFAREPMADWL*