ggKbase home page

scnpilot_solids1_trim150_scaffold_25995_2

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(179..1294)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 372.0
  • Bit_score: 708
  • Evalue 3.80e-201
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 365.0
  • Bit_score: 596
  • Evalue 8.00e-168
  • rbh
3-isopropylmalate dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSF9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 372.0
  • Bit_score: 708
  • Evalue 2.70e-201
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGACCGCCCATGAAACGCCCGTCGCCCGCACCTTCGACATCGCCGTCCTGCCCGGCGACGGGGTCGGTCCCGAAGTCGCCCTGGCCGCCCAGCGGGTGTTGACCTGCATCGGCGACATCTACGGGCACCGCTTCAACTTCACTGAACACCTGATCGGCGGCGCCGCCATCGACGCGACGGGCGAGTCCCTGCCGGAAGAGACGAAAGCCGCCTGTCTGGCCTCCGACGCCGTGCTGCTGGGCGCGGTCGGCGGGCCCAAGTGGGACGGCGCCCCGGTGCGGCCGGAACAGGGCCTGCTGGCCATCCGCAAGGCCATGGGCCTGTACGCCAACCTGCGCCCGTTGCAGGTCTCGCCGGTCCTGGCCCACCGCTCGCCGCTGAAGAAGGAGATCGTCGAGGGCGTCGATCTGATCGTCTTCCGCGAACTGACCAGCGGCGTCTATTTCGGCGAGCGCACCCGCACCGAAACCAGCGCCTCGGACCTGTGCGTCTATACGGTCGAGGAAATCGAGCGCGTCGCGCGCGCCGCCTTCCAGGCCGCCGAACAACGGCGCGGCAAGGTCACTTCGGTCGACAAGGCCAACGTCATGGAGACCAGTCGCCTGTGGCGCGAGGTCGTGACCCGCATCCACGCCGAGGAATATCCGCAGATCACCCTGGAGCACGCGCTGGTCGACTCCATGGCCATGCATCTGATCCGCAAGCCGCGCGACTATGACGTCATCCTGACCGAGAACATGTTCGGCGACATCCTGTCGGATGAAATCTCGGTGCTGGGCGGCTCGATCGGCCTGCTGCCCTCGGCCTCCCTGGGCGCCGACGGGCCGGGCCTGTTCGAGCCGATCCATGGCTCGGCGCCCGACATCGCCGGACAGGATCTGGCCAATCCGGTCGGCATGGTGCTGTCGGCGGCCATGATGCTGCGCCACAGCTTCGATCTGGAGGATGAGGCCGATTCCATCGAGGCGGCGGTCGCCGCCGTCCTGGCCTCGGGCGCCGTCACCGCCGATCTGGGCGGGCCGCTGGGCACGGTGTCGGCCACCCGCGCCATCGTCGACGCCATCCGCGCCATCCACTGGGCGGCGGCGCGCCATGTGCCGATGCACTGGGCCTAG
PROTEIN sequence
Length: 372
MTAHETPVARTFDIAVLPGDGVGPEVALAAQRVLTCIGDIYGHRFNFTEHLIGGAAIDATGESLPEETKAACLASDAVLLGAVGGPKWDGAPVRPEQGLLAIRKAMGLYANLRPLQVSPVLAHRSPLKKEIVEGVDLIVFRELTSGVYFGERTRTETSASDLCVYTVEEIERVARAAFQAAEQRRGKVTSVDKANVMETSRLWREVVTRIHAEEYPQITLEHALVDSMAMHLIRKPRDYDVILTENMFGDILSDEISVLGGSIGLLPSASLGADGPGLFEPIHGSAPDIAGQDLANPVGMVLSAAMMLRHSFDLEDEADSIEAAVAAVLASGAVTADLGGPLGTVSATRAIVDAIRAIHWAAARHVPMHWA*