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scnpilot_solids1_trim150_scaffold_28230_3

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1170..1376)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 138
  • Evalue 2.90e-30
RNA pseudouridylate synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 68.0
  • Bit_score: 102
  • Evalue 3.90e-20
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZV8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 138
  • Evalue 2.10e-30

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
CGCGTCACCCAGATGGAGCCGCAGCGCCTGCGTTTCATCCTGCGCGAAGGCCGCAACCGCCAGATTCGCCGCATGTGCGAGCTGGTCGGGCTGGAGGTCGTCGACCTCTATCGCATCCGCATCGGCCCGGTGAAGCTGGGCGACCTGCCGGAAGGCCGCTGGCGGATGCTGACGGCGGACGAACGCGCCGCGCTGATCAAGGGCTGA
PROTEIN sequence
Length: 69
RVTQMEPQRLRFILREGRNRQIRRMCELVGLEVVDLYRIRIGPVKLGDLPEGRWRMLTADERAALIKG*