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scnpilot_solids1_trim150_scaffold_40616_2

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: 475..1494

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 339.0
  • Bit_score: 682
  • Evalue 3.50e-193
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 331.0
  • Bit_score: 381
  • Evalue 3.70e-103
  • rbh
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 339.0
  • Bit_score: 682
  • Evalue 2.50e-193
  • rbh

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGATTTCGGTCGGCCGCCTCGATCTGGCGACTGAAGGCCTGCTGCTGCTGACCAACGACGGCGAACTCAGCCGGGCGCTGGAGCTGCCGGAAACGGCCCTGGTGCGCCAGTATCGCGCCCGTGCGCGCGGCCGCATCACCCAGGAACAGTTGGACAAGCTGAAGGACGGCGTGGTCGTCGACGGCGTGCGCTACGGCCCCGTGGAAGCCACCATCGATAAGGCCAAGGAAAAGGCTGAGGGTGAAAAGTCGTCGGCCAACCTGTGGCTCAGCGTCTCGATCACCGAGGGCAAGAACCGCGAAGTCCGCAAGGTGCTGGAGAGCATCGGCCTGACGGTCAATCGCCTGATCCGCCTGGCCTATGGTCCGTTCCAGCTCGGCACCCTGCCGGTCGGATCGGTCGAGGAAGTCGGCCCGCGCGTGATCCGCGAAATGCTGGCCGAGCATATCCGTCCCGAGAACTTGCCGACCGGCAATACGGTTGCGACTCCGGCGCCGATTCCGGGGCGTCGCACCGGGACGCCGATCGTGCGCGGCAAGTCCGGCTCGGCCATGTCGGATCCGTCGCGCAAGCCCAGCCGCGTTCGCGCCGCCGAGACGGCGGCTGAAGACGGCGCCGAGTTCGGCAAGCCCGCTCGCAAGGAAGGCTGGGCCAAGGCCAAACCGAAGTTCGAACACAAGAAGACCTTCAAGCCGCGCGCCCGTCCAGGCGATGACGAAGGGACGGAAGGCGGCGATCGTCCGCGCCGTCCGTTCACGCCGCGCGAACCGCGCGCCGACCAGTTCATCGACGACCGCCGAGGTCCGCCCAAGGGCGGCCGTCCCGGTGGAAAGCCCGGCGGCAAGCCGTTCGGTCGTCCCGGTGGAGCCGGTGGGCGTCCTGATGCGCGTTCGGACTCTCGTTCGGGCGACCGACCAGGCGGTCCTCGCGGCGGCGGCAAGCCGTTCGGAGGCAAACCTTTCGGCGGCAAGCCTTCGGGCGGTGCAGGCGGTCGTGGCGGCCCGCGCGGACGCGGCTGA
PROTEIN sequence
Length: 340
VISVGRLDLATEGLLLLTNDGELSRALELPETALVRQYRARARGRITQEQLDKLKDGVVVDGVRYGPVEATIDKAKEKAEGEKSSANLWLSVSITEGKNREVRKVLESIGLTVNRLIRLAYGPFQLGTLPVGSVEEVGPRVIREMLAEHIRPENLPTGNTVATPAPIPGRRTGTPIVRGKSGSAMSDPSRKPSRVRAAETAAEDGAEFGKPARKEGWAKAKPKFEHKKTFKPRARPGDDEGTEGGDRPRRPFTPREPRADQFIDDRRGPPKGGRPGGKPGGKPFGRPGGAGGRPDARSDSRSGDRPGGPRGGGKPFGGKPFGGKPSGGAGGRGGPRGRG*