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scnpilot_solids1_trim150_scaffold_40247_2

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(487..786)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline resistance protein, class A n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZE1_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 109
  • Evalue 1.90e-21
Tetracycline resistance protein, class A {ECO:0000313|EMBL:EGF94023.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 109
  • Evalue 2.70e-21
putative tetracycline-efflux transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 56.0
  • Bit_score: 74
  • Evalue 2.80e-11

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGTCCCTGCATCAGCCCAAGGTCCGCCGCGCGGCGATCGCCTTCATCCTCGTGACCGCGGTGCTGGACATCGTGGCCATGGGGATCGTCATTCCGGTCCTGCCGCATCTGATCGAGGAGTTCGTCGGGTCGAACGCGCGCGCGGGCCTGCTGAACGGGGTGTTCGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGCCGAACCTGTGGTGGCTGGCGGTCGGGCGGTTGGTGGCGGGCGTCACCTCGTCCAGCTTTACCACCATCTACGCCTATATGGCTGA
PROTEIN sequence
Length: 100
MSLHQPKVRRAAIAFILVTAVLDIVAMGIVIPVLPHLIEEFVGSNARAGLLNGVFVXXXXXXXXXXXXXXGAEPVVAGGRAVGGGRHLVQLYHHLRLYG*